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B5Y4Z2

- B5Y4Z2_PHATC

UniProt

B5Y4Z2 - B5Y4Z2_PHATC

Protein
Submitted name:

Predicted protein

Gene

PHATR_800

Organism
Phaeodactylum tricornutum (strain CCAP 1055/1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (25 Nov 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. AMP deaminase activity Source: InterPro

    GO - Biological processi

    1. IMP biosynthetic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Predicted proteinImported
    Gene namesi
    ORF Names:PHATR_800Imported
    OrganismiPhaeodactylum tricornutum (strain CCAP 1055/1)Imported
    Taxonomic identifieri556484 [NCBI]
    Taxonomic lineageiEukaryotaStramenopilesBacillariophytaBacillariophyceaeBacillariophycidaeNaviculalesPhaeodactylaceaePhaeodactylum
    ProteomesiUP000000759: Chromosome 3

    Interactioni

    Protein-protein interaction databases

    STRINGi2850.JGI800.

    Structurei

    3D structure databases

    ProteinModelPortaliB5Y4Z2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000092200.
    KOiK01490.

    Family and domain databases

    InterProiIPR001365. A/AMP_deaminase_dom.
    IPR006329. AMPD.
    [Graphical view]
    PANTHERiPTHR11359. PTHR11359. 1 hit.
    PfamiPF00962. A_deaminase. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    B5Y4Z2-1 [UniParc]FASTAAdd to Basket

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    DFSQDYGRLV EMVSEGAMRS FCFQRLQMLS ASFKMHLTIN GTIEREEQSN    50
    LLGTDFYRTM KIDNHIHAAA APSAKQFVEF VRRKLETEPD TVVSSDGRTL 100
    VQVFEDAGLD KDHLTIDAFD VLADYSVYKR FDNFNSKYSP FRMADMRRIF 150
    LKTTNHINGR YFAELLKIVI DRHEKSKGHN SACEMRLSIY GMERHEWYDL 200
    ALWVLRDWQH EDFPGPMTSG NNRWHIQIPR LWRIFSQKPI RDGQPQRSFL 250
    EMIENLFVPL FEATLHPEQH PEVSELLKHI VAFDSVDDEG ALEENCSCQR 300
    PHEWTTKKNP SYWWQLYFLW SNLEVLNHLR EARGLNSIAF RPHAGETGDP 350
    MHLASTYMLC QSINHGVGLD MQVSLQYLYY LDQIGLAMSP LSNNFLFTKI 400
    ADNPFAKYFR RGMNVTISTD DPLLFHMSDD ALLEEYSVAR ATFDLSMTDI 450
    MEIARNSVMQ SGFEVDFKKN WLGSDYQRGL TFCDEKITHV PLIRAKFRAE 500
    HLALE 505
    Length:505
    Mass (Da):58,867
    Last modified:November 25, 2008 - v1
    Checksum:i783A81DB4B885848
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported
    Non-terminal residuei505 – 5051Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001142 Genomic DNA. Translation: ACI65851.1.
    RefSeqiXP_002186381.1. XM_002186345.1.
    UniGeneiPtc.5073.

    Genome annotation databases

    EnsemblProtistsiPhatr800; Phatr800; Phatr800.
    GeneIDi7204392.
    KEGGipti:PHATR_800.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001142 Genomic DNA. Translation: ACI65851.1 .
    RefSeqi XP_002186381.1. XM_002186345.1.
    UniGenei Ptc.5073.

    3D structure databases

    ProteinModelPortali B5Y4Z2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 2850.JGI800.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi Phatr800 ; Phatr800 ; Phatr800 .
    GeneIDi 7204392.
    KEGGi pti:PHATR_800.

    Phylogenomic databases

    HOGENOMi HOG000092200.
    KOi K01490.

    Family and domain databases

    InterProi IPR001365. A/AMP_deaminase_dom.
    IPR006329. AMPD.
    [Graphical view ]
    PANTHERi PTHR11359. PTHR11359. 1 hit.
    Pfami PF00962. A_deaminase. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
      Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.
      , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
      Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCAP 1055/1Imported.
    2. Cited for: GENOME REANNOTATION.
      Strain: CCAP 1055/1Imported.

    Entry informationi

    Entry nameiB5Y4Z2_PHATC
    AccessioniPrimary (citable) accession number: B5Y4Z2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 25, 2008
    Last sequence update: November 25, 2008
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3