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B5Y4Z2 (B5Y4Z2_PHATC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length505 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processIMP biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionAMP deaminase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL ACI65851.1
Non-terminal residue5051 EMBL ACI65851.1

Sequences

Sequence LengthMass (Da)Tools
B5Y4Z2 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 783A81DB4B885848

FASTA50558,867
        10         20         30         40         50         60 
DFSQDYGRLV EMVSEGAMRS FCFQRLQMLS ASFKMHLTIN GTIEREEQSN LLGTDFYRTM 

        70         80         90        100        110        120 
KIDNHIHAAA APSAKQFVEF VRRKLETEPD TVVSSDGRTL VQVFEDAGLD KDHLTIDAFD 

       130        140        150        160        170        180 
VLADYSVYKR FDNFNSKYSP FRMADMRRIF LKTTNHINGR YFAELLKIVI DRHEKSKGHN 

       190        200        210        220        230        240 
SACEMRLSIY GMERHEWYDL ALWVLRDWQH EDFPGPMTSG NNRWHIQIPR LWRIFSQKPI 

       250        260        270        280        290        300 
RDGQPQRSFL EMIENLFVPL FEATLHPEQH PEVSELLKHI VAFDSVDDEG ALEENCSCQR 

       310        320        330        340        350        360 
PHEWTTKKNP SYWWQLYFLW SNLEVLNHLR EARGLNSIAF RPHAGETGDP MHLASTYMLC 

       370        380        390        400        410        420 
QSINHGVGLD MQVSLQYLYY LDQIGLAMSP LSNNFLFTKI ADNPFAKYFR RGMNVTISTD 

       430        440        450        460        470        480 
DPLLFHMSDD ALLEEYSVAR ATFDLSMTDI MEIARNSVMQ SGFEVDFKKN WLGSDYQRGL 

       490        500 
TFCDEKITHV PLIRAKFRAE HLALE 

« Hide

References

« Hide 'large scale' references
[1]"The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. expand/collapse author list , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCAP 1055/1 EMBL ACI65851.1.
[2]Diatom Consortium
Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S., Rokhsar D., Bowler C.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: CCAP 1055/1 EMBL ACI65851.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001142 Genomic DNA. Translation: ACI65851.1.
RefSeqXP_002186381.1. XM_002186345.1.
UniGenePtc.5073.

3D structure databases

ProteinModelPortalB5Y4Z2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING2850.JGI800.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsPhatr800; Phatr800; Phatr800.
GeneID7204392.
KEGGpti:PHATR_800.

Phylogenomic databases

HOGENOMHOG000092200.
KOK01490.

Family and domain databases

InterProIPR001365. A/AMP_deaminase_dom.
IPR006329. AMP_deaminase.
[Graphical view]
PANTHERPTHR11359. PTHR11359. 1 hit.
PfamPF00962. A_deaminase. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5Y4Z2_PHATC
AccessionPrimary (citable) accession number: B5Y4Z2
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: November 13, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)