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B5Y428

- B5Y428_PHATC

UniProt

B5Y428 - B5Y428_PHATC

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Protein
Submitted name:

Predicted protein

Gene
PHATR_46880
Organism
Phaeodactylum tricornutum (strain CCAP 1055/1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHATR_46880Imported
OrganismiPhaeodactylum tricornutum (strain CCAP 1055/1)
Taxonomic identifieri556484 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesBacillariophytaBacillariophyceaeBacillariophycidaeNaviculalesPhaeodactylaceaePhaeodactylum
ProteomesiUP000000759: Chromosome 11

Interactioni

Protein-protein interaction databases

STRINGi2850.JGI46880.

Structurei

3D structure databases

ProteinModelPortaliB5Y428.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000232662.
KOiK00799.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B5Y428-1 [UniParc]FASTAAdd to Basket

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MTIRIQPTVP SPKIYYYSYC YCWWYMGLVT LAVSCILRPP ALLVHGWATT    50
PTRVLGIVGR TSALVASSAE TTRHRHGASL SMSQSPSSSS FGSILGNLVS 100
SSWNRSNSGP SAVPGLDQAL IESPRSSWNE IRSLLESRMT TNAERNFRNN 150
LSTGYGVASP LHNVRLYDEA NQESDVRVTF YRDSASWCPY CQKVWMTLEE 200
KRIPYRVERV NMRCYGDKPA SFFRIQPGGQ IPVAVIDGKV YGQSNDILYA 250
LEEAFPQHKS LAPPQGMAME AQRLLRLERS LFSVWMYWLT GGRQRDEFRA 300
TLAEVETALA QNTDGPFFLG RDVTMVDCMF APFLERMAAS LLYFKGFQFR 350
VAPGVPTDYP AINAWFDAME TRESYQLTKS DYYTHCWDLP PQLGGCVYEK 400
GGEPFEQAIN GDRRLDGTHK SWELPLAPHN GGIEPDWEWA GDEAAARREA 450
VERVSANHQA IVKFAARGAG TKGLVPFSAP LADPKATPNE AVLQAVDTCL 500
QIVCLALLEG TDKYDTDMVK VAHIIQEKGG QEFTNGVVAS LAYLRDRVGV 550
PRDMRLPAAR QLRAHLNWSV GKLLDT 576
Length:576
Mass (Da):64,278
Last modified:November 25, 2008 - v1
Checksum:iE1F40D40BA5E88D7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001141 Genomic DNA. Translation: ACI65237.1.
RefSeqiXP_002185767.1. XM_002185731.1.
UniGeneiPtc.2695.

Genome annotation databases

EnsemblProtistsiPhatr46880; Phatr46880; Phatr46880.
GeneIDi7204724.
KEGGipti:PHATR_46880.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001141 Genomic DNA. Translation: ACI65237.1 .
RefSeqi XP_002185767.1. XM_002185731.1.
UniGenei Ptc.2695.

3D structure databases

ProteinModelPortali B5Y428.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 2850.JGI46880.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi Phatr46880 ; Phatr46880 ; Phatr46880 .
GeneIDi 7204724.
KEGGi pti:PHATR_46880.

Phylogenomic databases

HOGENOMi HOG000232662.
KOi K00799.

Family and domain databases

Gene3Di 1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProi IPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view ]
Pfami PF13417. GST_N_3. 1 hit.
[Graphical view ]
SUPFAMi SSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEi PS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
    Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.
    , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
    Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCAP 1055/1Imported.
  2. Cited for: GENOME REANNOTATION.
    Strain: CCAP 1055/1Imported.

Entry informationi

Entry nameiB5Y428_PHATC
AccessioniPrimary (citable) accession number: B5Y428
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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