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B5Y428

- B5Y428_PHATC

UniProt

B5Y428 - B5Y428_PHATC

Protein
Submitted name:

Predicted protein

Gene

PHATR_46880

Organism
Phaeodactylum tricornutum (strain CCAP 1055/1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (25 Nov 2008)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Predicted proteinImported
    Gene namesi
    ORF Names:PHATR_46880Imported
    OrganismiPhaeodactylum tricornutum (strain CCAP 1055/1)Imported
    Taxonomic identifieri556484 [NCBI]
    Taxonomic lineageiEukaryotaStramenopilesBacillariophytaBacillariophyceaeBacillariophycidaeNaviculalesPhaeodactylaceaePhaeodactylum
    ProteomesiUP000000759: Chromosome 11

    Interactioni

    Protein-protein interaction databases

    STRINGi2850.JGI46880.

    Structurei

    3D structure databases

    ProteinModelPortaliB5Y428.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000232662.
    KOiK00799.

    Family and domain databases

    Gene3Di1.20.1050.10. 1 hit.
    3.40.30.10. 1 hit.
    InterProiIPR010987. Glutathione-S-Trfase_C-like.
    IPR004045. Glutathione_S-Trfase_N.
    IPR012336. Thioredoxin-like_fold.
    [Graphical view]
    PfamiPF13417. GST_N_3. 1 hit.
    [Graphical view]
    SUPFAMiSSF47616. SSF47616. 1 hit.
    SSF52833. SSF52833. 1 hit.
    PROSITEiPS50405. GST_CTER. 1 hit.
    PS50404. GST_NTER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B5Y428-1 [UniParc]FASTAAdd to Basket

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    MTIRIQPTVP SPKIYYYSYC YCWWYMGLVT LAVSCILRPP ALLVHGWATT    50
    PTRVLGIVGR TSALVASSAE TTRHRHGASL SMSQSPSSSS FGSILGNLVS 100
    SSWNRSNSGP SAVPGLDQAL IESPRSSWNE IRSLLESRMT TNAERNFRNN 150
    LSTGYGVASP LHNVRLYDEA NQESDVRVTF YRDSASWCPY CQKVWMTLEE 200
    KRIPYRVERV NMRCYGDKPA SFFRIQPGGQ IPVAVIDGKV YGQSNDILYA 250
    LEEAFPQHKS LAPPQGMAME AQRLLRLERS LFSVWMYWLT GGRQRDEFRA 300
    TLAEVETALA QNTDGPFFLG RDVTMVDCMF APFLERMAAS LLYFKGFQFR 350
    VAPGVPTDYP AINAWFDAME TRESYQLTKS DYYTHCWDLP PQLGGCVYEK 400
    GGEPFEQAIN GDRRLDGTHK SWELPLAPHN GGIEPDWEWA GDEAAARREA 450
    VERVSANHQA IVKFAARGAG TKGLVPFSAP LADPKATPNE AVLQAVDTCL 500
    QIVCLALLEG TDKYDTDMVK VAHIIQEKGG QEFTNGVVAS LAYLRDRVGV 550
    PRDMRLPAAR QLRAHLNWSV GKLLDT 576
    Length:576
    Mass (Da):64,278
    Last modified:November 25, 2008 - v1
    Checksum:iE1F40D40BA5E88D7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001141 Genomic DNA. Translation: ACI65237.1.
    RefSeqiXP_002185767.1. XM_002185731.1.
    UniGeneiPtc.2695.

    Genome annotation databases

    EnsemblProtistsiPhatr46880; Phatr46880; Phatr46880.
    GeneIDi7204724.
    KEGGipti:PHATR_46880.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001141 Genomic DNA. Translation: ACI65237.1 .
    RefSeqi XP_002185767.1. XM_002185731.1.
    UniGenei Ptc.2695.

    3D structure databases

    ProteinModelPortali B5Y428.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 2850.JGI46880.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi Phatr46880 ; Phatr46880 ; Phatr46880 .
    GeneIDi 7204724.
    KEGGi pti:PHATR_46880.

    Phylogenomic databases

    HOGENOMi HOG000232662.
    KOi K00799.

    Family and domain databases

    Gene3Di 1.20.1050.10. 1 hit.
    3.40.30.10. 1 hit.
    InterProi IPR010987. Glutathione-S-Trfase_C-like.
    IPR004045. Glutathione_S-Trfase_N.
    IPR012336. Thioredoxin-like_fold.
    [Graphical view ]
    Pfami PF13417. GST_N_3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47616. SSF47616. 1 hit.
    SSF52833. SSF52833. 1 hit.
    PROSITEi PS50405. GST_CTER. 1 hit.
    PS50404. GST_NTER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
      Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.
      , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
      Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCAP 1055/1Imported.
    2. Cited for: GENOME REANNOTATION.
      Strain: CCAP 1055/1Imported.

    Entry informationi

    Entry nameiB5Y428_PHATC
    AccessioniPrimary (citable) accession number: B5Y428
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 25, 2008
    Last sequence update: November 25, 2008
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3