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B5Y428 (B5Y428_PHATC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:PHATR_46880 EMBL ACI65237.1
OrganismPhaeodactylum tricornutum (strain CCAP 1055/1) [Reference proteome]
Taxonomic identifier556484 [NCBI]
Taxonomic lineageEukaryotaStramenopilesBacillariophytaBacillariophyceaeBacillariophycidaeNaviculalesPhaeodactylaceaePhaeodactylum

Protein attributes

Sequence length576 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B5Y428 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: E1F40D40BA5E88D7

FASTA57664,278
        10         20         30         40         50         60 
MTIRIQPTVP SPKIYYYSYC YCWWYMGLVT LAVSCILRPP ALLVHGWATT PTRVLGIVGR 

        70         80         90        100        110        120 
TSALVASSAE TTRHRHGASL SMSQSPSSSS FGSILGNLVS SSWNRSNSGP SAVPGLDQAL 

       130        140        150        160        170        180 
IESPRSSWNE IRSLLESRMT TNAERNFRNN LSTGYGVASP LHNVRLYDEA NQESDVRVTF 

       190        200        210        220        230        240 
YRDSASWCPY CQKVWMTLEE KRIPYRVERV NMRCYGDKPA SFFRIQPGGQ IPVAVIDGKV 

       250        260        270        280        290        300 
YGQSNDILYA LEEAFPQHKS LAPPQGMAME AQRLLRLERS LFSVWMYWLT GGRQRDEFRA 

       310        320        330        340        350        360 
TLAEVETALA QNTDGPFFLG RDVTMVDCMF APFLERMAAS LLYFKGFQFR VAPGVPTDYP 

       370        380        390        400        410        420 
AINAWFDAME TRESYQLTKS DYYTHCWDLP PQLGGCVYEK GGEPFEQAIN GDRRLDGTHK 

       430        440        450        460        470        480 
SWELPLAPHN GGIEPDWEWA GDEAAARREA VERVSANHQA IVKFAARGAG TKGLVPFSAP 

       490        500        510        520        530        540 
LADPKATPNE AVLQAVDTCL QIVCLALLEG TDKYDTDMVK VAHIIQEKGG QEFTNGVVAS 

       550        560        570 
LAYLRDRVGV PRDMRLPAAR QLRAHLNWSV GKLLDT 

« Hide

References

« Hide 'large scale' references
[1]"The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. expand/collapse author list , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCAP 1055/1 EMBL ACI65237.1.
[2]Diatom Consortium
Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S., Rokhsar D., Bowler C.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: CCAP 1055/1 EMBL ACI65237.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001141 Genomic DNA. Translation: ACI65237.1.
RefSeqXP_002185767.1. XM_002185731.1.
UniGenePtc.2695.

3D structure databases

ProteinModelPortalB5Y428.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING2850.JGI46880.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsPhatr46880; Phatr46880; Phatr46880.
GeneID7204724.
KEGGpti:PHATR_46880.

Phylogenomic databases

HOGENOMHOG000232662.
KOK00799.
ProtClustDBCLSN2711143.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5Y428_PHATC
AccessionPrimary (citable) accession number: B5Y428
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: November 13, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)