B5Y3E7 (B5Y3E7_PHATC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL ACI65301.1

Gene names

ORF Names:

PHATR_46672 EMBL ACI65301.1

Organism

Phaeodactylum tricornutum (strain CCAP 1055/1)

Taxonomic identifier

556484 [NCBI]

Taxonomic lineage

Eukaryota › stramenopiles › Bacillariophyta › Bacillariophyceae › Bacillariophycidae › Naviculales › Phaeodactylaceae › Phaeodactylum

Protein attributes

Sequence length	1347 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	sodium:dicarboxylate symporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5Y3E7 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 98D775A390FA3566	FASTA	1,347	151,847
	10 20 30 40 50 60 MLQNIVYLPL HSFFDKNPRY DWLACKKAHN NLTPNLIATM SISIEHEDNT FKQGEHVEEN 70 80 90 100 110 120 IVDVYDDEEE VISNSGCGVL GRDDTKEKVI NWVGLIGDLF IRSLKCVVLP LVFINVIISV 130 140 150 160 170 180 VDMMTIGRAG SIGWKTIGLY LTTTVIASIL GILSILSFKP LFEEGTFTAS SPATIKLGCN 190 200 210 220 230 240 DSGEYKTELQ DGTLTCTADT GNSSQFFIED LSQSFVRASG SVRSDISLSD TIYEGVFTNR 250 260 270 280 290 300 LWRLISRPFA IAFSVALSKV FDRQRDHDTS FIIPFLKELD SVFLTIINWI IMCTPFAVLS 310 320 330 340 350 360 LIASAIGKQE DLADSFANVG YLVVATITAM ALQIAVVHCL IFGLVTRSNP WHYLKYMIPA 370 380 390 400 410 420 QTMAFACSSS AATIPMTLKC VQSTNRVPEP VARFVIPLGA TVNMDGGAIY FPCACIWLAV 430 440 450 460 470 480 LNGIDPDIAS YFLLVIISTI GSAGTAPVPS ASLVLIITAY NTVFNTTGVP EGFSYILAID 490 500 510 520 530 540 WFMDRLRTVV NVTGDTVVAG MVSHLCPDGL HETKTRHDSS VEDEPSTDEE VAKRLPSMPL 550 560 570 580 590 600 FGFRKQRKAS RSPSPTRGAA SSSTASRANT GTTRPLRSRR THVDSDERMH NPLGSPMLLP 610 620 630 640 650 660 TNYDPDGRLG QNAYQTSPSM NTCNNFLLGG NYYPGKDKKR RHYRTKAIWY RIFCSSGPRQ 670 680 690 700 710 720 IVTFIVSLYL FLWLPITHLL STSQAPSLTN FDWLLRDTTL QLPTMEEQRD TASKLNIERD 730 740 750 760 770 780 QLDAEGGISD RLRILEKIVP DWFHRNDEQP LAKPDVPVSS KTETQPIPTG DRIPQPRKDV 790 800 810 820 830 840 DSEHIVEDRP PENDGKVHSR KARITRMKES NKDGVEKGNE LANPKALEPY GGPALVVRKA 850 860 870 880 890 900 GDRIRHLGNT DLFVNETKCP ANLIPDDVQT TLVIQSSSNR LWILAETCKR WNDPIIAVIA 910 920 930 940 950 960 LTSTEDHDEV SALLSGWDDK CPHLQVIVYQ MDTDEEKPEM YPVNRLRNIG LDAVHTSHVL 970 980 990 1000 1010 1020 VADVDFIPAQ DLARLIRTTL LDRARLRVLK DDMIPKDQDA IVVPAFERLL AEPCTSEDSC 1030 1040 1050 1060 1070 1080 KEHLRSNSSF IPHTFDDLRS CIAEKSCIVF QSKVNWEGHF STHSEDWLKK KWYQGEPIAF 1090 1100 1110 1120 1130 1140 GEGKPSVRHI RTLDCFDSLR YEPYVVLQWC PTGKPDPVRA TAPYYDERFH GYGKNKIQYI 1150 1160 1170 1180 1190 1200 QHLRLAGYHF AVLPEGFIVH NPHRDSKAKE TWNNQIVWQR YFATSLLKRV DLSLRNLSQN 1210 1220 1230 1240 1250 1260 RIQCSANDWI TDRHFDLKVY FALCVFETIY RTERPLTPQR IEHFAFDTLR FHSPALRNHV 1270 1280 1290 1300 1310 1320 HPRNRQQWFG CRTDASSLGN EKATCYLYGK EIHPKHAKDS RFHPSGMFTL FGSAGKLIQR 1330 1340 SIRTNSGLLD YDVMKGWDEF RTISRDT

References

[1]

"The Phaeodactylum genome reveals the evolutionary history of diatom genomes." Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V. Nature 456:239-244(2008) [PubMed: 18923393] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCAP 1055/1 EMBL ACI65301.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001141 Genomic DNA. Translation: ACI65301.1.
RefSeq	XP_002185831.1. XM_002185795.1.
UniGene	Ptc.4267.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	GT49. Glycosyltransferase Family 49.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	Phatr46672; Phatr46672; Phatr46672.
GeneID	7204410.
KEGG	pti:PHATR_46672.
Phylogenomic databases
ProtClustDB	CLSN2711165.
Family and domain databases
InterPro	IPR001991. Na-dicarboxylate_symporter. [Graphical view]
PANTHER	PTHR11958. Na/diCO_symport. 1 hit.
Pfam	PF00375. SDF. 1 hit. [Graphical view]
PRINTS	PR00173. EDTRNSPORT.
ProtoNet	Search...

Entry information

Entry name

B5Y3E7_PHATC

Accession

Primary (citable) accession number: B5Y3E7

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	September 21, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)