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B5Y286 (RSMC_KLEP3) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal RNA small subunit methyltransferase C
EC=2.1.1.172
Alternative name(s):
16S rRNA m2G1207 methyltransferase
rRNA (guanine-N(2)-)-methyltransferase RsmC
Gene names
Name:rsmC
Ordered Locus Names:KPK_4786
OrganismKlebsiella pneumoniae (strain 342) [Complete proteome] [HAMAP]
Taxonomic identifier507522 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Klebsiella

Protein attributes

Sequence length342 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle By similarity. HAMAP MF_01862

Catalytic activity

S-adenosyl-L-methionine + guanosine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanosine(1207) in 16S rRNA. HAMAP MF_01862

Subunit structure

Monomer By similarity. HAMAP MF_01862

Subcellular location

Cytoplasm Potential HAMAP MF_01862.

Sequence similarities

Belongs to the methyltransferase superfamily. RsmC family.

Ontologies

Keywords
   Biological processrRNA processing
   Cellular componentCytoplasm
   LigandS-adenosyl-L-methionine
   Molecular functionMethyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionnucleic acid binding

Inferred from electronic annotation. Source: InterPro

rRNA (guanine-N2-)-methyltransferase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 342342Ribosomal RNA small subunit methyltransferase C HAMAP MF_01862
PRO_0000369723

Sequences

Sequence LengthMass (Da)Tools
B5Y286 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 122D98BC1BAEB981

FASTA34237,446
        10         20         30         40         50         60 
MSAFTPASEV LLRHSDDFES ARVLFAGDLQ DDLPARLDTA ASRAHTQQFH HWQVLNRQMG 

        70         80         90        100        110        120 
DNVRFSLVAE AADVADCDTL IYYWPKNKPE AQFQLMNLLS LLPVGIDIFV VGENRSGVRS 

       130        140        150        160        170        180 
AEQMLAEYAP LNKIDSARRC GLYHGRLEKQ PTFDAEAFWG EYALDNLTIK TLPGVFSRDG 

       190        200        210        220        230        240 
LDVGSQLLLS TLEPHTKGKV LDVGCGAGVL AAVLASHSPK VRLTLCDVSA PAVEASRATL 

       250        260        270        280        290        300 
AANGFAGDVF ASNVFSEVNG RFDMIISNPP FHDGLQTSLE AAQALIRGAV RHLNSGGELR 

       310        320        330        340 
IVANAFLPYP QVLDETFGFH EVIAQTGRFK VYRTIMTRQA KK

« Hide

References

[1]"Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice."
Fouts D.E., Tyler H.L., DeBoy R.T., Daugherty S., Ren Q., Badger J.H., Durkin A.S., Huot H., Shrivastava S., Kothari S., Dodson R.J., Mohamoud Y., Khouri H., Roesch L.F.W., Krogfelt K.A., Struve C., Triplett E.W., Methe B.A.
PLoS Genet. 4:E1000141-E1000141(2008) [PubMed: 18654632] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 342.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000964 Genomic DNA. Translation: ACI10152.1.
RefSeqYP_002240577.1. NC_011283.1.

3D structure databases

ProteinModelPortalB5Y286.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5Y286.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6936557.
GenomeReviewsGene locus KPK_4786 in contig CP000964_GR.
KEGGkpe:KPK_4786.
PATRIC20442715. VBIKlePne121904_4699.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG296757.
OMATGKFKVY.
ProtClustDBPRK09489.

Family and domain databases

HAMAPMF_01862. 16SrRNA_methyltr_C.
[Tree]
InterProIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR007848. Small_mtfrase.
[Graphical view]
KOK00564.
PfamPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRSMC_KLEP3
AccessionPrimary (citable) accession number: B5Y286
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: November 25, 2008
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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