Skip Header

Contribute Send feedback
Read comments (?) or add your own

B5Y0Q8 (B5Y0Q8_KLEP3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Name:bgaB EMBL ACI10706.1
Ordered Locus Names:KPK_4249
OrganismKlebsiella pneumoniae (strain 342) [Complete proteome] [HAMAP] EMBL ACI10706.1
Taxonomic identifier507522 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Klebsiella

Protein attributes

Sequence length685 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1571Proton donor By similarity PIRSR PIRSR001084-1
Active site3141Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1221Zinc By similarity PIRSR PIRSR001084-3
Metal binding1621Zinc By similarity PIRSR PIRSR001084-3
Metal binding1641Zinc By similarity PIRSR PIRSR001084-3
Metal binding1671Zinc By similarity PIRSR PIRSR001084-3
Binding site1181Substrate By similarity PIRSR PIRSR001084-2
Binding site1561Substrate By similarity PIRSR PIRSR001084-2
Binding site3221Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
B5Y0Q8 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: F7250B74D97F9329

FASTA68577,528
        10         20         30         40         50         60 
MNKFAPLHPK VSTLLHGADY NPEQWENDPD IIDKDIAMMQ QAKCNVMSVG IFSWAKLEPR 

        70         80         90        100        110        120 
EGVFNFAWLD TILDKLYAAG IHVFLATPSG ARPAWMSQRY PQVLRVGRDR VPALHGGRHN 

       130        140        150        160        170        180 
HCMSSPVYRE KTLEINTLLA ERYSSHPAVL GWHISNEYGG ECHCDLCQNR FRDWLKARYQ 

       190        200        210        220        230        240 
TLENLNQAWW STFWSHTYTD WSQIESPAPQ GEVSIHGLNL DWHRFNTAQV TDFCRHEIAP 

       250        260        270        280        290        300 
LKAANASLPV TTNFMEYFYD YDYWQLAEAL DFISWDSYPM WHRDKDETAL ACYTAMYHDM 

       310        320        330        340        350        360 
MRSLKGGKPF VLMESTPGAT NWQPTSKLKK PGMHILSSLQ AVAHGADSVQ YFQWRKSRGS 

       370        380        390        400        410        420 
VEKFHGAVVD HVGHIDTRIG REVSQLGEIL SKLPEVRGCR TEAKVAIIFD QQNRWALDDA 

       430        440        450        460        470        480 
QGPRNLGMEY EKTVNEHYRP FWEQGIAVDV IDADVDLTPY RLVIAPMLYM VRDGFAARAE 

       490        500        510        520        530        540 
AFVASGGHLV TTYWTGIVNE SDLCYLGGFP GPLRNLLGIW AEEIDCLNDG EFNLVQGLAG 

       550        560        570        580        590        600 
NQCGLQGPYQ VRHLCELIHT ESAQTLATYR DDFYAGRPAV TVNGFGKGKA WHVASRNDLA 

       610        620        630        640        650        660 
FQRDFFAALS RELDLPRAIA ADLPPGVVAT ARTDGESTFV FLQNYSAQSH ILTLPPGYWD 

       670        680 
CLTDAAAPDP LTLSAWDCRI LRRHA

« Hide

References

[1]"Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice."
Fouts D.E., Tyler H.L., DeBoy R.T., Daugherty S., Ren Q., Badger J.H., Durkin A.S., Huot H., Shrivastava S., Kothari S., Dodson R.J., Mohamoud Y., Khouri H., Roesch L.F.W., Krogfelt K.A., Struve C., Triplett E.W., Methe B.A.
PLoS Genet. 4:E1000141-E1000141(2008) [PubMed: 18654632] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000964 Genomic DNA. Translation: ACI10706.1.
RefSeqYP_002240049.1. NC_011283.1.

3D structure databases

ProteinModelPortalB5Y0Q8.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5Y0Q8.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6939602.
GenomeReviewsGene locus KPK_4249 in contig CP000964_GR.
KEGGkpe:KPK_4249.
PATRIC20441712. VBIKlePne121904_4206.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG476453.
OMAHGSDTVQ.
ProtClustDBCLSK888649.

Family and domain databases

InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5Y0Q8_KLEP3
AccessionPrimary (citable) accession number: B5Y0Q8
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info