B5XFL3 (B5XFL3_SALSA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
THO complex subunit 7 homolog EMBL ACI69633.1

Gene names

Name:

THOC7 EMBL ACI69633.1

Organism

Salmo salar (Atlantic salmon) EMBL ACI69633.1

Taxonomic identifier

8030 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Euteleostei › Protacanthopterygii › Salmoniformes › Salmonoidei › Salmonidae › Salmoninae › Salmo

Protein attributes

Sequence length	202 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	mRNA processing Inferred from electronic annotation. Source: InterPro
Cellular_component	THO complex part of transcription export complex Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5XFL3 [UniParc]. Last modified November 25, 2008. Version 1. Checksum: 9A3B6979AD8A0AF5	FASTA	202	23,481
	10 20 30 40 50 60 MGAVTDDEVI RKRLLIDGDG AGDDGRINVL LKSFTKWCNS TGSPEEGFTQ YQRMLGTLAQ 70 80 90 100 110 120 CEFSMGKTLL VYDMNLREME NYEKIYTDIE QNITSAHDKI SECKKEIQRA KRIRKNRQEY 130 140 150 160 170 180 DALAKVIQQH PDRHETLKQL EALDKELQQL SHIKENVEDK LELRKKQFHV LLSTNQELQQ 190 200 TLENDEKSEN DDTQESSMEN GE

References

[1]	"Salmo salar full-length cDNAs." cGRASP (B.F. Koop & W.S. Davidson) Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S., Koop B.F. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Brain EMBL ACI69633.1.
[2]	"Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome." Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M., Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S., Koop B.F. BMC Genomics 11:279-279(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Thymus EMBL ADM16304.1.
[3]	cGRASP (B.F. Koop & W.S. Davidson) Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Thymus EMBL ADM16304.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BT049832 mRNA. Translation: ACI69633.1. BT125563 mRNA. Translation: ADM16304.1.
RefSeq	NP_001134956.1. NM_001141484.1.
UniGene	Ssa.1278.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	100196455.
Organism-specific databases
CTD	80145.
Phylogenomic databases
HOVERGEN	HBG061300.
Family and domain databases
InterPro	IPR018018. THOC7. IPR008501. THOC7/Mft1. [Graphical view]
PANTHER	PTHR14854. PTHR14854. 1 hit.
Pfam	PF05615. THOC7. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5XFL3_SALSA

Accession

Primary (citable) accession number: B5XFL3

Entry history

Integrated into UniProtKB/TrEMBL:	November 25, 2008
Last sequence update:	November 25, 2008
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)