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Protein

Protein transport protein Sec61 subunit beta

Gene

SC61B

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Necessary for protein translocation in the endoplasmic reticulum.UniRule annotation

GO - Biological processi

Keywordsi

Biological processProtein transport, TranslocationUniRule annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Protein transport protein Sec61 subunit betaUniRule annotation
Gene namesi
Name:SC61BImported
Synonyms:LOC106574520Imported, sc61bImported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei73 – 92HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Endoplasmic reticulumUniRule annotation, Membrane

Family & Domainsi

Sequence similaritiesi

Belongs to the SEC61-beta family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOVERGENiHBG061281.
KOiK09481.

Family and domain databases

InterProiView protein in InterPro
IPR030671. Sec61-beta/Sbh.
IPR016482. SecG/Sec61-beta/Sbh.
PANTHERiPTHR13509. PTHR13509. 1 hit.
PfamiView protein in Pfam
PF03911. Sec61_beta. 1 hit.
PIRSFiPIRSF006398. Sec61_beta_euk. 1 hit.

Sequencei

Sequence statusi: Complete.

B5XE87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGPASSATN VGAGSRSPSK TVAPRAAGST VRQRKATSSG TRSAGRTTAS
60 70 80 90
AGGTGGMWRF YTEDSPGLKV GPVPVLVMSL LFIASVFMLH IWGKYTRS
Length:98
Mass (Da):10,088
Last modified:November 25, 2008 - v1
Checksum:i68110570EAAF9A16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT049356 mRNA. Translation: ACI69157.1.
BT049623 mRNA. Translation: ACI69424.1.
BT050200 mRNA. Translation: ACI70001.1.
BT050398 mRNA. Translation: ACI70199.1.
BT058310 mRNA. Translation: ACN10023.1.
BT058399 mRNA. Translation: ACN10112.1.
BT060010 mRNA. Translation: ACN12370.1.
BT060102 mRNA. Translation: ACN12462.1.
RefSeqiNP_001135088.1. NM_001141616.1.
XP_014005925.1. XM_014150450.1.
UniGeneiSsa.5769.

Genome annotation databases

GeneIDi100196587.
106574520.
KEGGisasa:100196587.
sasa:106574520.

Similar proteinsi

Entry informationi

Entry nameiB5XE87_SALSA
AccessioniPrimary (citable) accession number: B5XE87
Entry historyiIntegrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: August 30, 2017
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported