Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B5XCF9 (B5XCF9_SALSA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:CART EMBL ACI68529.1
OrganismSalmo salar (Atlantic salmon) EMBL ACI68529.1
Taxonomic identifier8030 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo

Protein attributes

Sequence length114 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
B5XCF9 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: FA4DFE9AF7C02B92

FASTA11412,741
        10         20         30         40         50         60 
MDSIRVRAVF YLGVCLSVFS VDCQKQMSPD NRLSSQDEQF PLVYVTRNLA DALEGLLEGG 

        70         80         90        100        110 
QQDNMIGLSV EKKASLIPRC DVGERCAMKH GPRIGRLCDC LRGTACNTFF LRCY 

« Hide

References

[1]cGRASP (B.F. Koop & W.S. Davidson)
Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S., Koop B.F.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Spleen EMBL ACI68529.1.
[2]"Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome."
Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M., Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S., Koop B.F.
BMC Genomics 11:279-279(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Spleen EMBL ACI68529.1.
[3]cGRASP (B.F. Koop & W.S. Davidson)
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Spleen EMBL ACI68529.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BT048728 mRNA. Translation: ACI68529.1.
RefSeqNP_001134699.1. NM_001141227.1.
UniGeneSsa.41486.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100196198.

Organism-specific databases

CTD100196198.

Phylogenomic databases

HOVERGENHBG083218.

Family and domain databases

Gene3D4.10.40.30. 1 hit.
InterProIPR009106. CART.
[Graphical view]
PANTHERPTHR16655. PTHR16655. 1 hit.
PfamPF06373. CART. 1 hit.
[Graphical view]
SUPFAMSSF64546. SSF64546. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5XCF9_SALSA
AccessionPrimary (citable) accession number: B5XCF9
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: July 9, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)