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Protein
Submitted name:

Abl interactor 1

Gene

ABI1

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Abl interactor 1Imported
Gene namesi
Name:ABI1Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliB5X297.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG050446.

Family and domain databases

InterProiIPR028457. ABI.
IPR028456. ABI1.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
IPR000727. T_SNARE_dom.
[Graphical view]
PANTHERiPTHR10460. PTHR10460. 1 hit.
PTHR10460:SF2. PTHR10460:SF2. 1 hit.
PfamiPF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B5X297-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKDQSCTDEI TQIFQEAPPA RQALLDNYNN LMNVADYCEN NYLQAGADAA
60 70 80 90 100
KALEETKNFT TQSLASVAYQ ISTLASNVLK LLDAQNSQLR HMESSVNLIG
110 120 130 140 150
QTVDMHREKV ARREIGAFTT AKRVPRSHKI IPPATGKEPK PKYTRSPITY
160 170 180 190 200
SDLDTQGHGM KNSGKLLGKA GSTRKHGGTI RSTSRAPPEP VQCPIAPSLS
210 220 230 240 250
QGASLTSLHD RSIGSSFGKA VPPPVVPSWP ASPDSDIITT LLEEAPPPPL
260 270 280 290 300
SLMEDGDAAM TAPAPPPPPP MAPPASSLDV PPPPPLPPTT SSPEPAHTSL
310 320 330 340 350
ACIPPPPAPP PLETAEENSF PPPMPPPSDE PLPPPTSEGL ELPGPPPSDE
360 370 380 390 400
VDEDLVIPAP PPPNFPDSVV GFDDDMSLLP PPADYDTTGP TDFLEKVVAL
410 420 430 440 450
YSYNSGNPGD LVFLEGEVIY LIKRNEDGWC EGLLNGVEGF FPGNYVDSST

S
Length:451
Mass (Da):47,938
Last modified:November 25, 2008 - v1
Checksum:i8A2A2C8ADCAC146F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT045166 mRNA. Translation: ACI33428.1.
RefSeqiNP_001133536.1. NM_001140064.1.
UniGeneiSsa.34585.

Genome annotation databases

GeneIDi100195035.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT045166 mRNA. Translation: ACI33428.1.
RefSeqiNP_001133536.1. NM_001140064.1.
UniGeneiSsa.34585.

3D structure databases

ProteinModelPortaliB5X297.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100195035.

Organism-specific databases

CTDi10006.

Phylogenomic databases

HOVERGENiHBG050446.

Family and domain databases

InterProiIPR028457. ABI.
IPR028456. ABI1.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
IPR000727. T_SNARE_dom.
[Graphical view]
PANTHERiPTHR10460. PTHR10460. 1 hit.
PTHR10460:SF2. PTHR10460:SF2. 1 hit.
PfamiPF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.
  2. "Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome."
    Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M., Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S., Koop B.F.
    BMC Genomics 11:279-279(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.
  3. cGRASP (B.F. Koop & W.S. Davidson)
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiB5X297_SALSA
AccessioniPrimary (citable) accession number: B5X297
Entry historyi
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: October 1, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.