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B5X297

- B5X297_SALSA

UniProt

B5X297 - B5X297_SALSA

Protein
Submitted name:

Abl interactor 1

Gene

ABI1

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (25 Nov 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein tyrosine kinase activator activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Abl interactor 1Imported
    Gene namesi
    Name:ABI1Imported
    OrganismiSalmo salar (Atlantic salmon)Imported
    Taxonomic identifieri8030 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliB5X297.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG050446.

    Family and domain databases

    InterProiIPR028457. ABI.
    IPR028456. ABI1.
    IPR012849. Abl-interactor_HHR_dom.
    IPR001452. SH3_domain.
    IPR000727. T_SNARE_dom.
    [Graphical view]
    PANTHERiPTHR10460. PTHR10460. 1 hit.
    PTHR10460:SF2. PTHR10460:SF2. 1 hit.
    PfamiPF07815. Abi_HHR. 1 hit.
    PF14604. SH3_9. 1 hit.
    [Graphical view]
    PRINTSiPR00452. SH3DOMAIN.
    SMARTiSM00326. SH3. 1 hit.
    [Graphical view]
    SUPFAMiSSF50044. SSF50044. 1 hit.
    PROSITEiPS50002. SH3. 1 hit.
    PS50192. T_SNARE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B5X297-1 [UniParc]FASTAAdd to Basket

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    MKDQSCTDEI TQIFQEAPPA RQALLDNYNN LMNVADYCEN NYLQAGADAA    50
    KALEETKNFT TQSLASVAYQ ISTLASNVLK LLDAQNSQLR HMESSVNLIG 100
    QTVDMHREKV ARREIGAFTT AKRVPRSHKI IPPATGKEPK PKYTRSPITY 150
    SDLDTQGHGM KNSGKLLGKA GSTRKHGGTI RSTSRAPPEP VQCPIAPSLS 200
    QGASLTSLHD RSIGSSFGKA VPPPVVPSWP ASPDSDIITT LLEEAPPPPL 250
    SLMEDGDAAM TAPAPPPPPP MAPPASSLDV PPPPPLPPTT SSPEPAHTSL 300
    ACIPPPPAPP PLETAEENSF PPPMPPPSDE PLPPPTSEGL ELPGPPPSDE 350
    VDEDLVIPAP PPPNFPDSVV GFDDDMSLLP PPADYDTTGP TDFLEKVVAL 400
    YSYNSGNPGD LVFLEGEVIY LIKRNEDGWC EGLLNGVEGF FPGNYVDSST 450
    S 451
    Length:451
    Mass (Da):47,938
    Last modified:November 25, 2008 - v1
    Checksum:i8A2A2C8ADCAC146F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT045166 mRNA. Translation: ACI33428.1.
    RefSeqiNP_001133536.1. NM_001140064.1.
    UniGeneiSsa.34585.

    Genome annotation databases

    GeneIDi100195035.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT045166 mRNA. Translation: ACI33428.1 .
    RefSeqi NP_001133536.1. NM_001140064.1.
    UniGenei Ssa.34585.

    3D structure databases

    ProteinModelPortali B5X297.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 100195035.

    Organism-specific databases

    CTDi 10006.

    Phylogenomic databases

    HOVERGENi HBG050446.

    Family and domain databases

    InterProi IPR028457. ABI.
    IPR028456. ABI1.
    IPR012849. Abl-interactor_HHR_dom.
    IPR001452. SH3_domain.
    IPR000727. T_SNARE_dom.
    [Graphical view ]
    PANTHERi PTHR10460. PTHR10460. 1 hit.
    PTHR10460:SF2. PTHR10460:SF2. 1 hit.
    Pfami PF07815. Abi_HHR. 1 hit.
    PF14604. SH3_9. 1 hit.
    [Graphical view ]
    PRINTSi PR00452. SH3DOMAIN.
    SMARTi SM00326. SH3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50044. SSF50044. 1 hit.
    PROSITEi PS50002. SH3. 1 hit.
    PS50192. T_SNARE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: BrainImported.
    2. "Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome."
      Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M., Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S., Koop B.F.
      BMC Genomics 11:279-279(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: BrainImported.
    3. cGRASP (B.F. Koop & W.S. Davidson)
      Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: BrainImported.

    Entry informationi

    Entry nameiB5X297_SALSA
    AccessioniPrimary (citable) accession number: B5X297
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 25, 2008
    Last sequence update: November 25, 2008
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)