Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B5X297 (B5X297_SALSA) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length451 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5X297 [UniParc].

Last modified November 25, 2008. Version 1.
Checksum: 8A2A2C8ADCAC146F

FASTA45147,938
        10         20         30         40         50         60 
MKDQSCTDEI TQIFQEAPPA RQALLDNYNN LMNVADYCEN NYLQAGADAA KALEETKNFT 

        70         80         90        100        110        120 
TQSLASVAYQ ISTLASNVLK LLDAQNSQLR HMESSVNLIG QTVDMHREKV ARREIGAFTT 

       130        140        150        160        170        180 
AKRVPRSHKI IPPATGKEPK PKYTRSPITY SDLDTQGHGM KNSGKLLGKA GSTRKHGGTI 

       190        200        210        220        230        240 
RSTSRAPPEP VQCPIAPSLS QGASLTSLHD RSIGSSFGKA VPPPVVPSWP ASPDSDIITT 

       250        260        270        280        290        300 
LLEEAPPPPL SLMEDGDAAM TAPAPPPPPP MAPPASSLDV PPPPPLPPTT SSPEPAHTSL 

       310        320        330        340        350        360 
ACIPPPPAPP PLETAEENSF PPPMPPPSDE PLPPPTSEGL ELPGPPPSDE VDEDLVIPAP 

       370        380        390        400        410        420 
PPPNFPDSVV GFDDDMSLLP PPADYDTTGP TDFLEKVVAL YSYNSGNPGD LVFLEGEVIY 

       430        440        450 
LIKRNEDGWC EGLLNGVEGF FPGNYVDSST S 

« Hide

References

[1]cGRASP (B.F. Koop & W.S. Davidson)
Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S., Koop B.F.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL ACI33428.1.
[2]"Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome."
Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M., Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S., Koop B.F.
BMC Genomics 11:279-279(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL ACI33428.1.
[3]cGRASP (B.F. Koop & W.S. Davidson)
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL ACI33428.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BT045166 mRNA. Translation: ACI33428.1.
RefSeqNP_001133536.1. NM_001140064.1.
UniGeneSsa.34585.

3D structure databases

ProteinModelPortalB5X297.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100195035.

Organism-specific databases

CTD10006.

Phylogenomic databases

HOVERGENHBG050446.

Family and domain databases

InterProIPR028457. ABI.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
IPR000727. T_SNARE_dom.
[Graphical view]
PANTHERPTHR10460. PTHR10460. 1 hit.
PfamPF07815. Abi_HHR. 1 hit.
[Graphical view]
PRINTSPR00452. SH3DOMAIN.
SMARTSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMSSF50044. SSF50044. 1 hit.
PROSITEPS50002. SH3. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5X297_SALSA
AccessionPrimary (citable) accession number: B5X297
Entry history
Integrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: March 19, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)