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Protein
Submitted name:

Apolipoprotein F

Gene

APOF

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Apolipoprotein FImported
Submitted name:
apolipoprotein F isoform X1Imported
Submitted name:
apolipoprotein F precursorImported
Gene namesi
Name:APOFImported
Synonyms:apofImported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500973225223 – 438Sequence analysisImportedAdd BLAST416

Keywords - PTMi

LipoproteinImported

Family & Domainsi

Keywords - Domaini

SignalSequence analysisImported

Phylogenomic databases

HOVERGENiHBG089204.

Family and domain databases

InterProiView protein in InterPro
IPR026114. APOF.
PANTHERiPTHR15011. PTHR15011. 1 hit.
PfamiView protein in Pfam
PF15148. Apolipo_F. 2 hits.

Sequencei

Sequence statusi: Complete.

B5X1J5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMHPKMKWLF LIQLLLIEQA LCRTPSPLAL KNTPAFKTSI LGEGDTIKKG
60 70 80 90 100
KQLLLGSQTQ LGLPSGAAES AAPEEWVVQD EARAQSAQRV VTTLKAKLQG
110 120 130 140 150
RILIQANTSC EELLSASTLQ DPSSALLPRE LLGLSLVPVL VAAGCPREAQ
160 170 180 190 200
TLVLRLYNLL GVEDTEELLI EVESLIASGA PHPRATTPPA SHVGKVQAER
210 220 230 240 250
HLQAVMFNIQ QLARAGEGRR GQGPSGKGKQ EQCQGWTRVN GTLLLGDAME
260 270 280 290 300
GATGGLEEAI RACESLGSQC AGVSRNRGQY QAVLKPGSRV VPSEDSDSEC
310 320 330 340 350
WIQQCQVQEE KSPVASGRRA RRSPQRNCVN KKEERVYNVV EWIPVVSTLY
360 370 380 390 400
NLGTAVYYTS VNCSEMAKER AILSAVDLGT DALMAVTGGT VGVAGYVAGA
410 420 430
GVKTGVKAGI KYLLSSMKQQ EDLIVNEYSW EEGVITIQ
Length:438
Mass (Da):47,070
Last modified:November 25, 2008 - v1
Checksum:i9174889F6A6612D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT044914 mRNA. Translation: ACI33176.1.
RefSeqiNP_001135105.1. NM_001141633.1.
XP_014022470.1. XM_014166995.1.
UniGeneiSsa.7175.

Genome annotation databases

GeneIDi100196604.

Similar proteinsi

Entry informationi

Entry nameiB5X1J5_SALSA
AccessioniPrimary (citable) accession number: B5X1J5
Entry historyiIntegrated into UniProtKB/TrEMBL: November 25, 2008
Last sequence update: November 25, 2008
Last modified: November 22, 2017
This is version 23 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported