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B5S3M4 (B5S3M4_RALSL) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.1.11 EMBL CAQ37276.1
Gene names
Name:pme EMBL CAQ37276.1
ORF Names:RSMK03579 EMBL CAQ37276.1
OrganismRalstonia solanacearum (Pseudomonas solanacearum) EMBL CAQ37276.1
Taxonomic identifier305 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pectinesterase family. RuleBase RU004180

Ontologies

Keywords
   Molecular functionHydrolase EMBL CAQ37276.1
Gene Ontology (GO)
   Biological processcell wall modification

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell wall

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectinesterase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5S3M4 [UniParc].

Last modified November 4, 2008. Version 1.
Checksum: 82E2AFC4C0B54AB4

FASTA39641,016
        10         20         30         40         50         60 
MQSTTLYLKT AAFLGGCSLF AATALAATST ATRPQLSNAD ARAYTIASYM ASFGTIGSLT 

        70         80         90        100        110        120 
TDNWDPTGGV GAVSGFRANY AVAADGSAQY KTVQAAIDAA VADGGVARKY ISVKAGTYNE 

       130        140        150        160        170        180 
LVCVPESAPP ITLYSLDANA NNTVIVYNNA NPTPASGAKT NPCMGTSSNA TVGTVRSATA 

       190        200        210        220        230        240 
MVRASNFNAR NLTFKNSYVE GTFADNNQSA VALAVRGDKA ILENVSVIGN QDTLYLGATN 

       250        260        270        280        290        300 
NTMVIRAYFK NSFIQGDTDF IFGAGTAVFH GCTIQYTAAR LGARATSYVF APSTAPDNPH 

       310        320        330        340        350        360 
GFLAINSTFN ATGNASNNST HLGRAWDQGV SGTSAYINGS SPNGQVVIRD SSLGAHIRLA 

       370        380        390 
DPWGPSTAGR PYCSSKCAYS ANRFFEYNNT GAGSGN 

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References

[1]"Genomic draft of Ralstonia solanacearum strain Molk2, a phylotype IIB3/biovar 1/race 2 strain isolated from banana in the Philippines."
Boucher C., Carrere S., Dossat C., Elbaz M., Genin S., Gouzy J., Prior P., Segurens B., Wincker P.
Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MolK2 EMBL CAQ37276.1.
[2]Genoscope - CEA
Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MolK2 EMBL CAQ37276.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU695240 Genomic DNA. Translation: CAQ37276.1.

3D structure databases

ProteinModelPortalB5S3M4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
IPR018040. Pectinesterase_AS.
IPR000070. Pectinesterase_cat.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF01095. Pectinesterase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
PROSITEPS00503. PECTINESTERASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5S3M4_RALSL
AccessionPrimary (citable) accession number: B5S3M4
Entry history
Integrated into UniProtKB/TrEMBL: November 4, 2008
Last sequence update: November 4, 2008
Last modified: November 16, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)