B5RTJ7 (B5RTJ7_DEBHA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DEHA2D16962p EMBL CAR65682.1

Gene names

Ordered Locus Names:

DEHA2D16962g

Organism

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii) [Complete proteome] EMBL CAR65682.1

Taxonomic identifier

284592 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Debaryomyces › Debaryomyces hansenii › Debaryomyces hansenii var. hansenii

Protein attributes

Sequence length	750 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 Zn(2)-C6 fungal-type DNA-binding domain. SAAS SAAS007219

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS007219
Cellular component	Nucleus SAAS SAAS007219
Ligand	DNA-binding SAAS SAAS007219 Metal-binding SAAS SAAS007219 Zinc SAAS SAAS007219
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: GOC transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: GOC
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding RNA polymerase II transcription factor activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5RTJ7 [UniParc]. Last modified November 4, 2008. Version 1. Checksum: B6085C047FF39F4B	FASTA	750	86,588
	10 20 30 40 50 60 MSSLPKKRKQ EANNKGTDSN TNPRLLSCQR CRTRKIKCNF EYPCSNCTKV GADCIKTVND 70 80 90 100 110 120 MRKKRPPANY VSNLEKQIEN ITDFFEKFKK LDSIEAKQKL IDSTDLNDFI NKDYQDYNTS 130 140 150 160 170 180 SSEIENYAYH STKHDIKNSS MSVYGPTSVY DNDLITRNSK APSKREEPSI NNFNKDPSIL 190 200 210 220 230 240 HCLKLFFTWQ YPDHNMFIFR EAFLIDFFDP KPDSLYCSRN LVLSICALGS RMSDDDKIYS 250 260 270 280 290 300 RSIEFYNEAR ISLLSQLDHP SITSLQSFLL LAFYDICDGS NSSGWMLSGN AMRMGFDLGF 310 320 330 340 350 360 QLNPEVWFLK SHDDLSPLDV AIRSRIYWGS YMADHFISLL LGRPSLLKIS DASIPETDDL 370 380 390 400 410 420 PDLEWIDDYR YLDPNCEAKK DTQISNPLKN VIKLINISDS MLNDIFTRSE DDHDKNNDDL 430 440 450 460 470 480 NLLSRMKKLS EYNMHIMKWK ESLPEDLAWD KNFLQETADN PTLSCIRYYY YILILCLNRP 490 500 510 520 530 540 FVGISKSAVE EHHLSPATIC TNAIEDLYVA IRRFKETHGL RRASIFMVYC SILSISVILL 550 560 570 580 590 600 TNTSKQLVNK KQERLQFFMS VLHGCSRTWK LAEKSYKLIK IKLQYSHSNE SDLKKEENHT 610 620 630 640 650 660 GSSNTNNEDT ENVFNSKYPN ISNNEQQENG REPFQLPRPL ESNSQIRSST TNFKRPPSIP 670 680 690 700 710 720 SPGQEYIEHR SFSPNEPATS LVNPRPSLHA ISSTDKNDHA YDKTIANANT ELLFDESLEF 730 740 750 FGGPPVLMTS DLFNEDWESL FPDYIFNPKN

References

[1]

"Genome evolution in yeasts." Genolevures Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S. , Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F., Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M., Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., Wincker P., Souciet J.-L. Nature 430:35-44(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR382136 Genomic DNA. Translation: CAR65682.1.
RefSeq	XP_002770328.1. XM_002770282.1.
3D structure databases
ProteinModelPortal	B5RTJ7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8998543.
KEGG	dha:DEHA2D16962g.
Phylogenomic databases
OMA	MFIFREA.
OrthoDB	EOG4X9BRM.
Family and domain databases
Gene3D	4.10.240.10. 1 hit.
InterPro	IPR007219. Transcription_factor_fun. IPR001138. Zn2-C6_fun-type_DNA-bd. [Graphical view]
Pfam	PF04082. Fungal_trans. 1 hit. PF00172. Zn_clus. 1 hit. [Graphical view]
SMART	SM00906. Fungal_trans. 1 hit. SM00066. GAL4. 1 hit. [Graphical view]
SUPFAM	SSF57701. Fungi_TrN. 1 hit.
PROSITE	PS00463. ZN2_CY6_FUNGAL_1. 1 hit. PS50048. ZN2_CY6_FUNGAL_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5RTJ7_DEBHA

Accession

Primary (citable) accession number: B5RTJ7

Entry history

Integrated into UniProtKB/TrEMBL:	November 4, 2008
Last sequence update:	November 4, 2008
Last modified:	May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)