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B5RMX9

- PTH_BORDL

UniProt

B5RMX9 - PTH_BORDL

Protein

Peptidyl-tRNA hydrolase

Gene

pth

Organism
Borrelia duttonii (strain Ly)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (04 Nov 2008)
      Previous versions | rss
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    Functioni

    The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.UniRule annotation

    Catalytic activityi

    N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA.UniRule annotation

    GO - Molecular functioni

    1. aminoacyl-tRNA hydrolase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    Hydrolase

    Enzyme and pathway databases

    BioCyciBDUT412419:GJ78-793-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Peptidyl-tRNA hydrolaseUniRule annotation (EC:3.1.1.29UniRule annotation)
    Short name:
    PTHUniRule annotation
    Gene namesi
    Name:pthUniRule annotation
    Ordered Locus Names:BDU_793
    OrganismiBorrelia duttonii (strain Ly)
    Taxonomic identifieri412419 [NCBI]
    Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeBorrelia
    ProteomesiUP000000611: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 188188Peptidyl-tRNA hydrolasePRO_1000092911Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi412419.BDU_793.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PTH family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0193.
    HOGENOMiHOG000004797.
    KOiK01056.
    OMAiWSKEENE.
    OrthoDBiEOG6C5RTR.

    Family and domain databases

    Gene3Di3.40.50.1470. 1 hit.
    HAMAPiMF_00083. Pept_tRNA_hydro_bact.
    InterProiIPR001328. Pept_tRNA_hydro.
    IPR018171. Pept_tRNA_hydro_CS.
    [Graphical view]
    PANTHERiPTHR17224. PTHR17224. 1 hit.
    PfamiPF01195. Pept_tRNA_hydro. 1 hit.
    [Graphical view]
    SUPFAMiSSF53178. SSF53178. 1 hit.
    TIGRFAMsiTIGR00447. pth. 1 hit.
    PROSITEiPS01195. PEPT_TRNA_HYDROL_1. 1 hit.
    PS01196. PEPT_TRNA_HYDROL_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B5RMX9-1 [UniParc]FASTAAdd to Basket

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    MNLLIVGLGN PGSNFLHTRH NVGFGLIDKL VMKNALSLRK AKNYEYADFN    50
    IDSRRIVLIK PLTYMNLSGN IFPFVFSKFY MKINNLLVVV DNVDLPLGKC 100
    RLRKVGGAST HNGLRSISES LGSTKYGRLY IGVGNNSAFA LKDFVLSKFN 150
    DSELVRVKNV FNFLSEEILG IDEFSFEHKI ATINSSSF 188
    Length:188
    Mass (Da):21,062
    Last modified:November 4, 2008 - v1
    Checksum:iAE79B567EEC62D5A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000976 Genomic DNA. Translation: ACH93715.1.
    RefSeqiYP_002222421.1. NC_011229.1.

    Genome annotation databases

    EnsemblBacteriaiACH93715; ACH93715; BDU_793.
    GeneIDi6918019.
    KEGGibdu:BDU_793.
    PATRICi20563708. VBIBorDut9941_0798.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000976 Genomic DNA. Translation: ACH93715.1 .
    RefSeqi YP_002222421.1. NC_011229.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 412419.BDU_793.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACH93715 ; ACH93715 ; BDU_793 .
    GeneIDi 6918019.
    KEGGi bdu:BDU_793.
    PATRICi 20563708. VBIBorDut9941_0798.

    Phylogenomic databases

    eggNOGi COG0193.
    HOGENOMi HOG000004797.
    KOi K01056.
    OMAi WSKEENE.
    OrthoDBi EOG6C5RTR.

    Enzyme and pathway databases

    BioCyci BDUT412419:GJ78-793-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1470. 1 hit.
    HAMAPi MF_00083. Pept_tRNA_hydro_bact.
    InterProi IPR001328. Pept_tRNA_hydro.
    IPR018171. Pept_tRNA_hydro_CS.
    [Graphical view ]
    PANTHERi PTHR17224. PTHR17224. 1 hit.
    Pfami PF01195. Pept_tRNA_hydro. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53178. SSF53178. 1 hit.
    TIGRFAMsi TIGR00447. pth. 1 hit.
    PROSITEi PS01195. PEPT_TRNA_HYDROL_1. 1 hit.
    PS01196. PEPT_TRNA_HYDROL_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Borrelia recurrentis, the agent of deadly louse-borne relapsing fever, is a degraded subset of tick-borne Borrelia duttonii."
      Lescot M., Audic S., Robert C., Nguyen T.T., Blanc G., Cutler S.J., Wincker P., Couloux A., Claverie J.-M., Raoult D., Drancourt M.
      PLoS Genet. 4:E1000185-E1000185(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ly.

    Entry informationi

    Entry nameiPTH_BORDL
    AccessioniPrimary (citable) accession number: B5RMX9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 24, 2009
    Last sequence update: November 4, 2008
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3