Skip Header

Contribute Send feedback
Read comments (?) or add your own

B5RF38 (B5RF38_SALG2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative glycosyl hydrolase EMBL CAR35952.1
Gene names
Ordered Locus Names:SG0044
OrganismSalmonella gallinarum (strain 287/91 / NCTC 13346) [Complete proteome] [HAMAP]
Taxonomic identifier550538 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella › Salmonella gallinarum

Protein attributes

Sequence length679 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL CAR35952.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5RF38 [UniParc].

Last modified November 4, 2008. Version 1.
Checksum: 22134B8E7EE4ED73

FASTA67978,412
        10         20         30         40         50         60 
MPFMQQDPRR LVWQQNDRYL WIEPWGENSL RVRSGRHLPV MRNEDWALTE PVAESQCHID 

        70         80         90        100        110        120 
YEHHQATLTN GKIIAIVNQK GQVTFYRHPH KPLLQEFWRL RGEIGEDESS HGQYVSALNL 

       130        140        150        160        170        180 
EGREFRPIQG GKYSLKARFE ATEGEKIYGM GQYQQANLDL KGCVLELAQR NSQASVPFML 

       190        200        210        220        230        240 
SSLGYGFLWN NPAVGRVTFA QNVTEWEAQV SEQLDYWITA GDTPAEISRA YALATGTPPM 

       250        260        270        280        290        300 
MPDYAMGFWQ CKLRYRTQEE LLEVAREYKR RNLPISVIVI DFFHWPNQGD WMFDARDWPD 

       310        320        330        340        350        360 
PDAMIAELKS LGIELMVSVW PTVDNRTESY REMRENGWLV QTERGLPINM DFLGNTTYFD 

       370        380        390        400        410        420 
ATHPGARDYV WGKAKRNYYD KGVKLFWLDE AEPEFSVYDY DNYRYHAGPV LEVGNIYPRM 

       430        440        450        460        470        480 
YAKTFFDGMK ADGEDQVINL LRCVWAGSQK YGALVWSGDI HSSFISLRNQ FAAGLNMGIA 

       490        500        510        520        530        540 
GIPWWTTDIG GFHGGNIHDP KFHELLIRWF QWGVFSPVMR LHGNRDPQIL PAQPYRDGIA 

       550        560        570        580        590        600 
QCPTGAPNEV WSYGEEVCDV LTGCLALREK LKPYIKALME ETHKHNTPVM RPLFFEFPEQ 

       610        620        630        640        650        660 
ETSWTITDQY CFGPDLLIAP VMHEGMRERD VWLPEGETWT DLATGESYSG GQTLHYATPL 

       670 
NRIPVFIREG GQYRSLLNL

« Hide

References

[1]"Comparative genome analysis of Salmonella enteritidis PT4 and Salmonella gallinarum 287/91 provides insights into evolutionary and host adaptation pathways."
Thomson N.R., Clayton D.J., Windhorst D., Vernikos G., Davidson S., Churcher C., Quail M.A., Stevens M., Jones M.A., Watson M., Barron A., Layton A., Pickard D., Kingsley R.A., Bignell A., Clark L., Harris B., Ormond D. expand/collapse author list , Abdellah Z., Brooks K., Cherevach I., Chillingworth T., Woodward J., Norberczak H., Lord A., Arrowsmith C., Jagels K., Moule S., Mungall K., Saunders M., Whitehead S., Chabalgoity J.A., Maskell D., Humphreys T., Roberts M., Barrow P.A., Dougan G., Parkhill J.
Genome Res. 18:1624-1637(2008) [PubMed: 18583645] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM933173 Genomic DNA. Translation: CAR35952.1.
RefSeqYP_002225186.1. NC_011274.1.

3D structure databases

ProteinModelPortalB5RF38.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5RF38.

Protein family/group databases

CAZyGH31. Glycoside Hydrolase Family 31.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6924246.
GenomeReviewsGene locus SG0044 in contig AM933173_GR.
KEGGseg:SG0044.
PATRIC18498166. VBISalEnt1629_0046.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG329982.
OMAWNNPAIG.
ProtClustDBCLSK873205.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR011013. Glyco_hydro-type_carb-bd.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 2 hits.
KOK01811.
PANTHERPTHR22762. Glyco_hydro_31. 1 hit.
PfamPF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5RF38_SALG2
AccessionPrimary (citable) accession number: B5RF38
Entry history
Integrated into UniProtKB/TrEMBL: November 4, 2008
Last sequence update: November 4, 2008
Last modified: December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info