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B5R9A5 (YJEA_SALG2) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized protein YjeA
Gene names
Name:yjeA
Ordered Locus Names:SG4187
OrganismSalmonella gallinarum (strain 287/91 / NCTC 13346) [Complete proteome] [HAMAP]
Taxonomic identifier550538 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella › Salmonella gallinarum

Protein attributes

Sequence length325 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processlysyl-tRNA aminoacylation

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: InterPro

lysine-tRNA ligase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 325325Uncharacterized protein YjeA HAMAP MF_00174
PRO_1000097907

Sequences

Sequence LengthMass (Da)Tools
B5R9A5 [UniParc].

Last modified November 4, 2008. Version 1.
Checksum: 273DE7CCC8332822

FASTA32536,751
        10         20         30         40         50         60 
MSETATWQPS ASIPNLLKRA AIMAEIRRFF ADRGVLEVET PCMSQATVTD IHLFPFETRF 

        70         80         90        100        110        120 
VGPGHSQGIN LYLMTSPEYH MKRLLAAGCG PVFQLCRSFR NEEMGRHHNP EFTMLEWYRP 

       130        140        150        160        170        180 
HYDMYRLMNE VDDLLQQVLD CQPAESLSYQ QAFQGHLEID PLSADKTQLR EAVAKLDLSN 

       190        200        210        220        230        240 
IADTEEDRDT LLQLLLTMGV EPHIGKEKPT FIYHFPASQA SLAQISTEDH RVAERFEVYY 

       250        260        270        280        290        300 
KGIELANGFH ELTDAREQQQ RFEQDNRKRA ARGLPQQPID QNLLDALAAG LPDCSGVALG 

       310        320 
VDRLVMLALG AESLADVIAF TVDRA

« Hide

References

[1]"Comparative genome analysis of Salmonella enteritidis PT4 and Salmonella gallinarum 287/91 provides insights into evolutionary and host adaptation pathways."
Thomson N.R., Clayton D.J., Windhorst D., Vernikos G., Davidson S., Churcher C., Quail M.A., Stevens M., Jones M.A., Watson M., Barron A., Layton A., Pickard D., Kingsley R.A., Bignell A., Clark L., Harris B., Ormond D. expand/collapse author list , Abdellah Z., Brooks K., Cherevach I., Chillingworth T., Woodward J., Norberczak H., Lord A., Arrowsmith C., Jagels K., Moule S., Mungall K., Saunders M., Whitehead S., Chabalgoity J.A., Maskell D., Humphreys T., Roberts M., Barrow P.A., Dougan G., Parkhill J.
Genome Res. 18:1624-1637(2008) [PubMed: 18583645] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 287/91 / NCTC 13346.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM933173 Genomic DNA. Translation: CAR39953.1.
RefSeqYP_002228907.1. NC_011274.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB5R9A5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6923638.
GenomeReviewsGene locus SG4187 in contig AM933173_GR.
KEGGseg:SG4187.
PATRIC18507203. VBISalEnt1629_4453.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG631383.
OMAMPEASGI.
ProtClustDBPRK09350.

Family and domain databases

HAMAPMF_00174. YjeA.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004525. Lys-tRNA-synth-rel.
IPR018149. Lys-tRNA-synth_II_C.
[Graphical view]
KOK04568.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF7. PTHR22594:SF7. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
[Graphical view]
PRINTSPR00982. TRNASYNTHLYS.
TIGRFAMsTIGR00462. GenX. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYJEA_SALG2
AccessionPrimary (citable) accession number: B5R9A5
Entry history
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: November 4, 2008
Last modified: January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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