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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyA

Organism
Salmonella gallinarum (strain 287/91 / NCTC 13346)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi104Calcium 1UniRule annotation1
Metal bindingi198Calcium 1UniRule annotation1
Metal bindingi206Calcium 2UniRule annotation1
Active sitei235NucleophileUniRule annotation1
Metal bindingi239Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei265Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
Name:amyAImported
Ordered Locus Names:SG1092Imported
OrganismiSalmonella gallinarum (strain 287/91 / NCTC 13346)Imported
Taxonomic identifieri550538 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000008321 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliB5R7G9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 402AamyInterPro annotationAdd BLAST399

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR006048. A-amylase/branching_C.
IPR013776. A-amylase_thermo.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B5R7G9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNPTLLQYF HWYYPDGGKL WSELAERADG LNDIGINMVW LPPACKGASG
60 70 80 90 100
GYSVGYDTYD LFDLGEFDQQ GTIATKYGDK RQLLTAIDAL KKNNIAVLLD
110 120 130 140 150
VVVNHKMGAD EKERIRVQRV NQDDRTQIDD NIIECEGWTR YTFPARAGQY
160 170 180 190 200
SNFIWDYHCF SGIDHIENPD EDGIFKIVND YTGDGWNDQV DDELGNFDYL
210 220 230 240 250
MGENIDFRNH AVTEEIKYWA RWVMEQTHCD GFRLDAVKHI PAWFYKEWIE
260 270 280 290 300
HVQAVAPKPL FIVAEYWSHE VDKLQTYIDQ VDGKTMLFDA PLQMKFHEAS
310 320 330 340 350
RQGAEYDMRH IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL
360 370 380 390 400
AYALILLREN GVPSVFYPDL YGASYEDNGE NGETCRVDMP VINQLDRLIL
410 420 430 440 450
ARQRFAHGIQ TLFFDHPNCI AFSRSGTEEN PGCVVVLSNG DDGEKTLLLG
460 470 480 490
DNYANKTWRD FLGNRSQHVV TNDQGEATFF CNAGSVSVWV IEDV
Length:494
Mass (Da):56,476
Last modified:November 4, 2008 - v1
Checksum:i4B837BED635A03DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM933173 Genomic DNA. Translation: CAR36977.1.
RefSeqiWP_000795495.1. NC_011274.1.

Genome annotation databases

EnsemblBacteriaiCAR36977; CAR36977; EBG00000232852.
KEGGiseg:SG1092.
PATRICi18500461. VBISalEnt1629_1168.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM933173 Genomic DNA. Translation: CAR36977.1.
RefSeqiWP_000795495.1. NC_011274.1.

3D structure databases

ProteinModelPortaliB5R7G9.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR36977; CAR36977; EBG00000232852.
KEGGiseg:SG1092.
PATRICi18500461. VBISalEnt1629_1168.

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR006048. A-amylase/branching_C.
IPR013776. A-amylase_thermo.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB5R7G9_SALG2
AccessioniPrimary (citable) accession number: B5R7G9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 4, 2008
Last sequence update: November 4, 2008
Last modified: May 10, 2017
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.