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Unreviewed, UniProtKB/TrEMBL B5QZS5 (B5QZS5_SALEP)

Last modified March 2, 2010. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
Tartronate semialdehyde reductase (Tsar) EMBL CAR34664.1
EC=1.1.1.60 EMBL CAR34664.1
Gene names
Name:garR EMBL CAR34664.1
Ordered Locus Names:SEN3088
OrganismSalmonella enteritidis PT4 (strain P125109) [Complete proteome] [HAMAP]
Taxonomic identifier550537 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella › Salmonella enteritidis

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Protein attributes

Sequence length296 AA.
Sequence statusComplete.
Protein existencePredicted.

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Sequences

Sequence LengthMass (Da)Tools
B5QZS5-1 [UniParc].

Last modified November 4, 2008. Version 1.
Checksum: A62B62F3B91F9DFC

FASTA29630,729
        10         20         30         40         50         60 
MTMKVGFIGL GIMGKPMSKN LLKAGYSLVV SDRNPEAIAD VIAAGAETAS TAKAIAEQCD 

        70         80         90        100        110        120 
VIITMLPNSP HVKEVALGEN GIIEGAKPGT VLIDMSSIAP LASREISDAL KAKGVEMLDA 

       130        140        150        160        170        180 
PVSGGEPKAI DGTLSVMVGG DKAIFDKYYD LMKAMAGSVV HTGDIGAGNV TKLANQVIVA 

       190        200        210        220        230        240 
LNIAAMSEAL TLATKAGVNP DLVYQAIRGG LAGSTVLDAK APMVMDRNFK PGFRIDLHIK 

       250        260        270        280        290 
DLANALDTSH GVGAQLPLTA AVMEMMQALR ADGHGNDDHS ALACYYEKLA KVEVTR

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References

[1]"Comparative genome analysis of Salmonella enteritidis PT4 and Salmonella gallinarum 287/91 provides insights into evolutionary and host adaptation pathways."
Thomson N.R., Clayton D.J., Windhorst D., Vernikos G., Davidson S., Churcher C., Quail M.A., Stevens M., Jones M.A., Watson M., Barron A., Layton A., Pickard D., Kingsley R.A., Bignell A., Clark L., Harris B., Ormond D. expand/collapse author list , Abdellah Z., Brooks K., Cherevach I., Chillingworth T., Woodward J., Norberczak H., Lord A., Arrowsmith C., Jagels K., Moule S., Mungall K., Saunders M., Whitehead S., Chabalgoity J.A., Maskell D., Humphreys T., Roberts M., Barrow P.A., Dougan G., Parkhill J.
Genome Res. 18:1624-1637(2008) [PubMed: 18583645] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM933172 Genomic DNA. Translation: CAR34664.1.
RefSeqYP_002245154.1.

3D structure databases

SMRB5QZS5. Positions 3-296.
ModBaseSearch...

Proteomic databases

PRIDEB5QZS5.

Genome annotation databases

GeneID6949191.
GenomeReviewsGene locus SEN3088 in contig AM933172_GR.
KEGGset:SEN3088.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG729179.
OMAWSRRRES.
ProtClustDBPRK11559.

Family and domain databases

InterProIPR002204. 3-OH-isobutyrate_DH-rel_CS.
IPR015815. 3hydroxyacid_DH/Rdtase.
IPR008927. 6-PGluconate_DH_C-like.
IPR006183. 6-phosphogluconate_DH.
IPR006115. 6PGDH_NAD-bd.
IPR013328. DH_multihelical.
IPR016040. NAD(P)-bd_dom.
IPR006398. Tartro_sem_red.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
G3DSA:1.10.1040.10. Opine_DH. 1 hit.
PANTHERPTHR22981. 3hydroxy_acid_DH. 1 hit.
PfamPF03446. NAD_binding_2. 1 hit.
[Graphical view]
PRINTSPR00076. 6PGDHDRGNASE.
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
SSF51735. NAD(P)-bd. 1 hit.
TIGRFAMsTIGR01505. tartro_sem_red. 1 hit.
PROSITEPS00895. 3_HYDROXYISOBUT_DH. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameB5QZS5_SALEP
AccessionPrimary (citable) accession number: B5QZS5
Entry history
Integrated into UniProtKB/TrEMBL: November 4, 2008
Last sequence update: November 4, 2008
Last modified: March 2, 2010
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information