B5QXN6 (B5QXN6_SALEP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL CAR35471.1

Gene names

Ordered Locus Names:

SEN3897 EMBL CAR35471.1

Organism

Salmonella enteritidis PT4 (strain P125109) [Complete proteome] [HAMAP] EMBL CAR35471.1

Taxonomic identifier

550537 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella › Salmonella choleraesuis › Salmonella enterica I › Salmonella enteritidis

Protein attributes

Sequence length	368 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5QXN6 [UniParc]. Last modified November 4, 2008. Version 1. Checksum: 70B464CD639C7DEC	FASTA	368	39,741
	10 20 30 40 50 60 MMKLAEIQAA CGVLCVDLAA VVDNYQTLAR HVAPAQCGAV LKANGYGLGA EAIAPALYAA 70 80 90 100 110 120 NCRIFFVAQL SEGVALRKIL SADAMVVLLN GVMPQAMPLC CAQQITPLLN SVDQVMAWLA 130 140 150 160 170 180 LQEARSQRRP VLIQLDSGMS RLGVTPEQLA RLAAIFRQRG WAAPDYIISH LANADRPDHA 190 200 210 220 230 240 LNVYQHTLLQ QAKEAFPTSR YSLANSCGMF LHPAWREDLC RPGVALFGVA QPWFSTPLKP 250 260 270 280 290 300 AFTLTLSILR VQDVPVGTPI GYGSTVTTTR PLRIATVSAG YADGIPRNLR PPAGVCWRGV 310 320 330 340 350 360 RLPVLGRVCM DSFMVDASAI MPTPGDVVEF IGVSQTLEEV AAACDTIPYE IMTRLGGRFR RIMQPAEA

References

[1]

"Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways." Thomson N.R., Clayton D.J., Windhorst D., Vernikos G., Davidson S., Churcher C., Quail M.A., Stevens M., Jones M.A., Watson M., Barron A., Layton A., Pickard D., Kingsley R.A., Bignell A., Clark L., Harris B., Ormond D. , Abdellah Z., Brooks K., Cherevach I., Chillingworth T., Woodward J., Norberczak H., Lord A., Arrowsmith C., Jagels K., Moule S., Mungall K., Sanders M., Whitehead S., Chabalgoity J.A., Maskell D., Humphrey T., Roberts M., Barrow P.A., Dougan G., Parkhill J. Genome Res. 18:1624-1637(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: P125109 EMBL CAR35471.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM933172 Genomic DNA. Translation: CAR35471.1.
RefSeq	YP_002245945.1. NC_011294.1.
3D structure databases
ProteinModelPortal	B5QXN6.
ModBase	Search...
Protein-protein interaction databases
STRING	550537.SEN3897.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6948378.
KEGG	set:SEN3897.
PATRIC	32338508. VBISalEnt14964_3983.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031445.
KO	K01775.
OMA	YCTPDKI.
ProtClustDB	CLSK247080.
Enzyme and pathway databases
BioCyc	SENT550537:GJFI-3961-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5QXN6_SALEP

Accession

Primary (citable) accession number: B5QXN6

Entry history

Integrated into UniProtKB/TrEMBL:	November 4, 2008
Last sequence update:	November 4, 2008
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)