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B5QX57 (B5QX57_SALEP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Possible pectinesterase EMBL CAR32317.1
EC=3.1.1.11 EMBL CAR32317.1
Gene names
Name:ybhC EMBL CAR32317.1
Ordered Locus Names:SEN0731
OrganismSalmonella enteritidis PT4 (strain P125109) [Complete proteome] [HAMAP]
Taxonomic identifier550537 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella › Salmonella enteritidis

Protein attributes

Sequence length427 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pectinesterase family. RuleBase RU004180

Ontologies

Keywords
   DomainSignal EMBL CAR32317.1
   Molecular functionHydrolase EMBL CAR32317.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcell wall modification

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell wall

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectinesterase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL CAR32317.1
Chain24 – 427404 Potential EMBL CAR32317.1
PRO_5000397366

Sequences

Sequence LengthMass (Da)Tools
B5QX57 [UniParc].

Last modified November 4, 2008. Version 1.
Checksum: 71764048A3E8653C

FASTA42745,893
        10         20         30         40         50         60 
MNTLSVSRLA LALAFGVTLS ACSSTPPDQI PSDQTAPGTA SRPILSANEA KNFVAARYFA 

        70         80         90        100        110        120 
SLTPNTAPWS PSPITLPAQP DFVVGPAGTP GVTHTSIQAA VDAAMVKRTN KRQYIAIMPG 

       130        140        150        160        170        180 
DYQGTVYVPA APGSLTLYGT GEKPIDVKIG MAIDGEMSVA DWRRAVNPGG KYMPGKPAWY 

       190        200        210        220        230        240 
MFDNCQSKHA ATIGVMCSAA FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDKV 

       250        260        270        280        290        300 
QINKVNILGR QNTFFVTNSG VQNRLQTDRQ PRTLVTNSYI EGDVDMVSGR GAVVFDNTNF 

       310        320        330        340        350        360 
QVVNSRTQQE AYVFAPATLS NIYYGFLAIN SRFNASGDGV AQLGRSLDVD ANTNGQVVIR 

       370        380        390        400        410        420 
DSVINEGFNV AKPWADAVIS KRPFAGNTGT VDDKDEVQRN LNDTNYNRMW EYNNRGVGSK 


VVAEPKQ

« Hide

References

[1]"Comparative genome analysis of Salmonella enteritidis PT4 and Salmonella gallinarum 287/91 provides insights into evolutionary and host adaptation pathways."
Thomson N.R., Clayton D.J., Windhorst D., Vernikos G., Davidson S., Churcher C., Quail M.A., Stevens M., Jones M.A., Watson M., Barron A., Layton A., Pickard D., Kingsley R.A., Bignell A., Clark L., Harris B., Ormond D. expand/collapse author list , Abdellah Z., Brooks K., Cherevach I., Chillingworth T., Woodward J., Norberczak H., Lord A., Arrowsmith C., Jagels K., Moule S., Mungall K., Saunders M., Whitehead S., Chabalgoity J.A., Maskell D., Humphreys T., Roberts M., Barrow P.A., Dougan G., Parkhill J.
Genome Res. 18:1624-1637(2008) [PubMed: 18583645] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM933172 Genomic DNA. Translation: CAR32317.1.
RefSeqYP_002242875.1. NC_011294.1.

3D structure databases

ProteinModelPortalB5QX57.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5QX57.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6950833.
GenomeReviewsGene locus SEN0731 in contig AM933172_GR.
KEGGset:SEN0731.
PATRIC32331903. VBISalEnt14964_0742.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG416454.
OMAFLATNSR.
ProtClustDBPRK10531.

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
IPR000070. Pectinesterase_cat.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KOK01051.
PfamPF01095. Pectinesterase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5QX57_SALEP
AccessionPrimary (citable) accession number: B5QX57
Entry history
Integrated into UniProtKB/TrEMBL: November 4, 2008
Last sequence update: November 4, 2008
Last modified: December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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