Skip Header

Contribute Send feedback
Read comments (?) or add your own

B5QV19 (B5QV19_SALEP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393
Gene names
Name:sodC EMBL CAR33189.1
Ordered Locus Names:SEN1607 EMBL CAR33189.1
OrganismSalmonella enteritidis PT4 (strain P125109) [Complete proteome] [HAMAP] EMBL CAR33189.1
Taxonomic identifier550537 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella ›

Protein attributes

Sequence length173 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential EMBL CAR33189.1
Chain20 – 173154 Potential EMBL CAR33189.1
PRO_5000397242

Sequences

Sequence LengthMass (Da)Tools
B5QV19 [UniParc].

Last modified November 4, 2008. Version 1.
Checksum: 511A19E8057F1255

FASTA17317,721
        10         20         30         40         50         60 
MKRLSLAMVT LLACAGAQAA SEKVEMNLVT AQGVGQSIGT VVIDETEGGL KFTPHLKALP 

        70         80         90        100        110        120 
PGEHGFHIHA NGSCQPAIKD GQAVAAEAAG GHLDPQNTGK HEGPEGQGHL GDLPVLVVNN 

       130        140        150        160        170 
DGIATEPVTA PRLKSLDEVK DKALMIHVGG DNMSDQPKPL GGGGTRYACG VIK

« Hide

References

[1]"Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways."
Thomson N.R., Clayton D.J., Windhorst D., Vernikos G., Davidson S., Churcher C., Quail M.A., Stevens M., Jones M.A., Watson M., Barron A., Layton A., Pickard D., Kingsley R.A., Bignell A., Clark L., Harris B., Ormond D. expand/collapse author list , Abdellah Z., Brooks K., Cherevach I., Chillingworth T., Woodward J., Norberczak H., Lord A., Arrowsmith C., Jagels K., Moule S., Mungall K., Sanders M., Whitehead S., Chabalgoity J.A., Maskell D., Humphrey T., Roberts M., Barrow P.A., Dougan G., Parkhill J.
Genome Res. 18:1624-1637(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: P125109 EMBL CAR33189.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM933172 Genomic DNA. Translation: CAR33189.1.
RefSeqYP_002243707.1. NC_011294.1.

3D structure databases

ProteinModelPortalB5QV19.
SMRB5QV19. Positions 20-173.
ModBaseSearch...

Protein-protein interaction databases

STRING550537.SEN1607.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6947830.
KEGGset:SEN1607.
PATRIC32333687. VBISalEnt14964_1627.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2032.
HOGENOMHOG000263449.
KOK04565.
OMANTNSHQG.
ProtClustDBPRK10290.

Enzyme and pathway databases

BioCycSENT550537:GJFI-1623-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperones.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SOD_Cu_Zn. 1 hit.
PROSITEPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5QV19_SALEP
AccessionPrimary (citable) accession number: B5QV19
Entry history
Integrated into UniProtKB/TrEMBL: November 4, 2008
Last sequence update: November 4, 2008
Last modified: May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info