Skip Header

Contribute Send feedback
Read comments (?) or add your own

B5MEM6 (B5MEM6_BACHO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Alkaline, thermotolerant, and maltotetraose-producing amylase EMBL BAG70894.1
Gene names
Name:amyA EMBL BAG70894.1
OrganismBacillus halodurans EMBL BAG70894.1
Taxonomic identifier86665 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length958 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5MEM6 [UniParc].

Last modified November 4, 2008. Version 1.
Checksum: D2A5CCAB30399990

FASTA958107,164
        10         20         30         40         50         60 
MNASYVKKVS LYLLLSFVIT LPLFSPTFSI NSVDASQGGE QQSFSWDNAT VYFAITDRFH 

        70         80         90        100        110        120 
DGNPSNNQSY GRPQEDAWGQ NIGTFHGGDL QGLTDKLNEG YFTELGINAI WITAPYEQVH 

       130        140        150        160        170        180 
GWVGGGSDGD FAHYAYHGYY ALDYTMIDQN MGTVEDMREF VHTAHEQGIR VVLDVVMNHP 

       190        200        210        220        230        240 
GYNTIKDMHE YGFGNPGVSE HWTPGQGQNW HDVHQQINYE DAGAWRHWWG PWIRAGIAGY 

       250        260        270        280        290        300 
ESCGNSEITM CLAGLPDFRT ELTHSVGLPP LLETKWNQER QGGYEDWIVP AANDLRRDLG 

       310        320        330        340        350        360 
VAPADYIVKW LSAWVEEFGI DGFRVDTAKH VELSRWQQLK DAANEALWKW REENPEAPGA 

       370        380        390        400        410        420 
NWTDDFWMVG EVWGHGVGRS EYFDHGFDSV INFTFQGEHG NGPAYRLDTM ESTFSRYADA 

       430        440        450        460        470        480 
INTDSTFNVL SYLSQHDTQL YPRERLIDGG TYLMLLPGGV QVFYGDETAR PFGPTGSDPH 

       490        500        510        520        530        540 
QGTRSSMNWD SVNEEVLHHW QKMGQFRSNH LAVGAGEHRQ IAASPYTFSR TYVEGDVDDR 

       550        560        570        580        590        600 
VVVVVGASGE TTIDVSSVFS DGQQVRDFYT GNVTVVENGH VTFPAHRNGV ILIERAGDLL 

       610        620        630        640        650        660 
PSVSASPAGG EFDREQQEVT LYVQHAEWGA YTIDGSDPKE EGTAFANGDV ITVGRELNID 

       670        680        690        700        710        720 
ESLTLRLYAE NETGEAKAEF TFTKVPAYPQ VFADPPGGTF AGDTLKVTLH TQNVEGGTYS 

       730        740        750        760        770        780 
IDGSDEQAFT DGDEIMIGKG IEAGSETTLQ LKAENEFGTI EETYTYTKST GLTIYFKKPD 

       790        800        810        820        830        840 
SWGTPHLYYY DTNPKVDEPT WSEAPEMEHY EGDWYTHTIE GVERVQLLFK DRGTNQWPGP 

       850        860        870        880        890        900 
GEPGFFRDQD GWFDGEWHVD RPGDATDITI YYKTGWTHPH IHYSLNQGAW TTLPGVPLTK 

       910        920        930        940        950 
SEYEGYVKVT IEAEEGSQLR AAFNNGSGQW DNNQGRDYDF SSGVHTLADG RILSGTPK

« Hide

References

[1]"Purification and characterization of five alkaline, thermotolerant, and maltotetraose-producing alpha-amylases from Bacillus halodurans MS-2-5, and production of recombinant enzymes in Escherichia coli."
Murakami S., Nagasaki K., Nishimoto H., Shigematu R., Umesaki J., Takenaka S., Kaulpiboon J., Prousoontorn M., Limpaseni T., Pongsawasdi P., Aoki K.
Enzyme Microb. Technol. 43:321-328(2008)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MS-2-5 EMBL BAG70894.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB359903 Genomic DNA. Translation: BAG70894.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyCBM25. Carbohydrate-Binding Module Family 25.
CBM26. Carbohydrate-Binding Module Family 26.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR005085. CBM_fam25.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
SM01066. CBM_25. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5MEM6_BACHO
AccessionPrimary (citable) accession number: B5MEM6
Entry history
Integrated into UniProtKB/TrEMBL: November 4, 2008
Last sequence update: November 4, 2008
Last modified: January 25, 2012
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info