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Protein
Submitted name:

Synaptogyrin-1

Gene

SYNGR1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Synaptogyrin-1Imported
Submitted name:
cDNA FLJ52856, highly similar to Synaptogyrin-1Imported
Gene namesi
Name:SYNGR1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 22

Organism-specific databases

EuPathDBiHostDB:ENSG00000100321.14
HGNCiHGNC:11498 SYNGR1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei30 – 49HelicalSequence analysisAdd BLAST20
Transmembranei69 – 92HelicalSequence analysisAdd BLAST24
Transmembranei104 – 126HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000100321

PTM / Processingi

Proteomic databases

MaxQBiB5MCD7
PRIDEiB5MCD7

Expressioni

Gene expression databases

BgeeiENSG00000100321
ExpressionAtlasiB5MCD7 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 169MARVELInterPro annotationAdd BLAST150

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG4016 Eukaryota
ENOG4111F8S LUCA
GeneTreeiENSGT00510000046450
HOGENOMiHOG000220816
HOVERGENiHBG000896

Family and domain databases

InterProiView protein in InterPro
IPR008253 Marvel
IPR016579 Synaptogyrin
PANTHERiPTHR10838 PTHR10838, 1 hit
PfamiView protein in Pfam
PF01284 MARVEL, 1 hit
PROSITEiView protein in PROSITE
PS51225 MARVEL, 1 hit

Sequencei

Sequence statusi: Complete.

B5MCD7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGGAYGAGK AGGAFDPYTL VRQPHTILRV VSWLFSIVVF GSIVNEGYLN
60 70 80 90 100
SASEGEEFCI YNRNPNACSY GVAVGVLAFL TCLLYLALDV YFPQISSVKD
110 120 130 140 150
RKKAVLSDIG VSAFWAFLWF VGFCYLANQW QVSKPKDNPL NEGTDAARAA
160
IAFSFFSIFT WRSGATSPP
Length:169
Mass (Da):18,465
Last modified:October 14, 2008 - v1
Checksum:iB935E3EB2425DE16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL022326 Genomic DNA No translation available.
AK295863 mRNA Translation: BAH12206.1
UniGeneiHs.216226

Genome annotation databases

EnsembliENST00000406293; ENSP00000385447; ENSG00000100321
UCSCiuc062ekz.1 human

Similar proteinsi

Entry informationi

Entry nameiB5MCD7_HUMAN
AccessioniPrimary (citable) accession number: B5MCD7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 23, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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