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B5LWS8 (B5LWS8_COFCA) Unreviewed, UniProtKB/TrEMBL

Last modified January 11, 2011. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Galactosyl transferase EMBL ACH58908.1
Gene names
Name:GT1 EMBL ACH58908.1
OrganismCoffea canephora (Robusta coffee) EMBL ACH58908.1
Taxonomic identifier49390 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › asterids › lamiids › Gentianales › Rubiaceae › Ixoroideae › Coffeeae › Coffea

Protein attributes

Sequence length444 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Molecular functionTransferase EMBL ACH58908.1
Gene Ontology (GO)
   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity, transferring hexosyl groups

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5LWS8 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: 0E51822DEBF7730D

FASTA44451,052
        10         20         30         40         50         60 
MTRIKVHTKA PTFFRDCRSF ILAVLVAILL FYALWSFTET AWTNLSVSAI FSNTTTDHCT 

        70         80         90        100        110        120 
SQPQSLNRAH DPPEPTFYDD PELCYTLDKP IDNWDDKRKS WLKLHPSFAD SIQDRILLLT 

       130        140        150        160        170        180 
GSQPSPCKSP IGDHLLLRGS KNKADYCRIH GYGIFYSNAC FDPKLCNVWA KVAVIRASMV 

       190        200        210        220        230        240 
AHPEAEWIWW MDSDAIITDM DFKIPLQRYK EHNLVVPGWP NLVYEKKSWV AVNTGSFLMR 

       250        260        270        280        290        300 
NCEWSLEFLD VWASMSPRSP DYKYWSETLM STLSDKVIPG ADEQSSLVYL LLREKKKWGD 

       310        320        330        340        350        360 
MTYLENQYYL HGYWVAIVGR LNDIIKKYLD TEAKVPVLRR RVAEVVSESL DGVWEKYLRD 

       370        380        390        400        410        420 
AGGFGNSGWR RPFITHFTGC QPCTGKRDPA YKGNACWVAM EKALNFADNQ VLRRYGFMHP 

       430        440 
DLGNGSSVSP VPFDFPADEK EELV

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References

[1]"Characterization and expression analysis of genes directing galactomannan synthesis in coffee."
Pre M., Caillet V., Sobilo J., McCarthy J.
Ann. Bot. 102:207-220(2008) [PubMed: 18562467] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Young leaves EMBL ACH58908.1.
[2]Mendocilla Sato E., Pre M., de Kochko A., McCarthy J.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Young leaves EMBL ACH58908.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EU916744 mRNA. Translation: ACH58908.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT34. Glycosyltransferase Family 34.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR008630. Glyco_trans_34.
[Graphical view]
PfamPF05637. Glyco_transf_34. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5LWS8_COFCA
AccessionPrimary (citable) accession number: B5LWS8
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: January 11, 2011
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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