B5IH56 (B5IH56_ACIB4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose bisphosphate carboxylase, type III EMBL EDY34409.1
EC=4.1.1.39 EMBL EDY34409.1

Gene names

Ordered Locus Names:	Aboo_1084
ORF Names:	ABOONEI_952 EMBL EDY34409.1

Organism

Aciduliprofundum boonei (strain DSM 19572 / T469) [Complete proteome] [HAMAP]

Taxonomic identifier

439481 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › unclassified Euryarchaeota › Aciduliprofundum › Aciduliprofundum boonei

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL EDY34409.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5IH56 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: C8667540053F3B77	FASTA	420	47,364
	10 20 30 40 50 60 MTYIDLNYQP RESDLLVWFR AEPPAGKDMK YVADRIAEES SIGTWTDLKT LLPEIWEKLR 70 80 90 100 110 120 ARVYEIDEKN KYVKIAYPLH LFEIKNMPAI LASVAGNVFG MKSVEALRVL DIRFPKELIQ 130 140 150 160 170 180 GYLGPKYGVQ GVREMTKVYD RPFLGTIIKP KIGLPAKMHA EVAYEAWVGG LDIVKDDENL 190 200 210 220 230 240 ASQEFNRFEE RLALTLEKKD IAEEETGEKK IYLVNITAPY KEMIRRAELV QDSGNEFVMI 250 260 270 280 290 300 DVFISGFSAV QSYREEGFKM AIHAHRAMHA AITRNPEHGI NMLTLAKVYR LLGVDNLHIG 310 320 330 340 350 360 TAVGKMEGSA KEVSEIREEI QLENVPANES RFEQKWYEIK PVLAVASGGL HPGHVPAVVD 370 380 390 400 410 420 ILGKDIVIQA GGGVHGHPEG TRAGAKAMRE ALEAKMQGIP LEEYAKEHKE LREALEKFLH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Electron microscopy encounters with unusual thermophiles helps direct genomic analysis of Aciduliprofundum boonei." Reysenbach A.L., Flores G.E. Geobiology 6:331-336(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: T469 EMBL EDY34409.1.
[2]	"Complete sequence of Aciduliprofundum boonei T469." Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Flores G., Reysenbach A.-L., Woyke T. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 19572 / T469.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001941 Genomic DNA. Translation: ADD08893.1. DS990535 Genomic DNA. Translation: EDY34409.1.
RefSeq	YP_003483455.1. NC_013926.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADD08893; ADD08893; Aboo_1084. EDY34409; EDY34409; ABOONEI_952.
GeneID	8828042.
KEGG	abi:Aboo_1084.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000230831.
KO	K01601.
OMA	HRAMHAA.
ProtClustDB	PRK04208.
Enzyme and pathway databases
BioCyc	ABOO439481:GJNL-1119-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR017712. RuBisCO_III. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
TIGRFAMs	TIGR03326. rubisco_III. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5IH56_ACIB4

Accession

Primary (citable) accession number: B5IH56

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)