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B5IH56 (B5IH56_ACIB4) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL EDY34409.1
Gene names
Ordered Locus Names:Aboo_1084 EMBL ADD08893.1
ORF Names:ABOONEI_952 EMBL EDY34409.1
OrganismAciduliprofundum boonei (strain DSM 19572 / T469) [Complete proteome] [HAMAP]
Taxonomic identifier439481 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaAciduliprofundum

Protein attributes

Sequence length420 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL EDY34409.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5IH56 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: C8667540053F3B77

FASTA42047,364
        10         20         30         40         50         60 
MTYIDLNYQP RESDLLVWFR AEPPAGKDMK YVADRIAEES SIGTWTDLKT LLPEIWEKLR 

        70         80         90        100        110        120 
ARVYEIDEKN KYVKIAYPLH LFEIKNMPAI LASVAGNVFG MKSVEALRVL DIRFPKELIQ 

       130        140        150        160        170        180 
GYLGPKYGVQ GVREMTKVYD RPFLGTIIKP KIGLPAKMHA EVAYEAWVGG LDIVKDDENL 

       190        200        210        220        230        240 
ASQEFNRFEE RLALTLEKKD IAEEETGEKK IYLVNITAPY KEMIRRAELV QDSGNEFVMI 

       250        260        270        280        290        300 
DVFISGFSAV QSYREEGFKM AIHAHRAMHA AITRNPEHGI NMLTLAKVYR LLGVDNLHIG 

       310        320        330        340        350        360 
TAVGKMEGSA KEVSEIREEI QLENVPANES RFEQKWYEIK PVLAVASGGL HPGHVPAVVD 

       370        380        390        400        410        420 
ILGKDIVIQA GGGVHGHPEG TRAGAKAMRE ALEAKMQGIP LEEYAKEHKE LREALEKFLH 

« Hide

References

« Hide 'large scale' references
[1]"Electron microscopy encounters with unusual thermophiles helps direct genomic analysis of Aciduliprofundum boonei."
Reysenbach A.L., Flores G.E.
Geobiology 6:331-336(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: T469 EMBL EDY34409.1.
[2]"Complete sequence of Aciduliprofundum boonei T469."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Flores G., Reysenbach A.-L., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 19572 / T469.
[3]"Complete sequence of Aciduliprofundum boonei T469."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Flores G., Reysenbach A.-L., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: T469 EMBL ADD08893.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001941 Genomic DNA. Translation: ADD08893.1.
DS990535 Genomic DNA. Translation: EDY34409.1.
RefSeqYP_003483455.1. NC_013926.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD08893; ADD08893; Aboo_1084.
EDY34409; EDY34409; ABOONEI_952.
GeneID8828042.
KEGGabi:Aboo_1084.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000230831.
KOK01601.
OMAHRAMHAA.
ProtClustDBPRK04208.

Enzyme and pathway databases

BioCycABOO439481:GJNL-1119-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR017712. RuBisCO_III.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsTIGR03326. rubisco_III. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5IH56_ACIB4
AccessionPrimary (citable) accession number: B5IH56
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: April 16, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)