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B5FTX4 (B5FTX4_SALDC) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.3.1.17 EMBL ACH75334.1
Gene names
Ordered Locus Names:SeD_A3294
OrganismSalmonella dublin (strain CT_02021853) [Complete proteome] [HAMAP] EMBL ACH75334.1
Taxonomic identifier439851 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonellaSalmonella dublin

Protein attributes

Sequence length455 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACH75334.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processgluconeogenesis

Inferred from electronic annotation. Source: InterPro

   Molecular function4 iron, 4 sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

L-serine ammonia-lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5FTX4 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: 91BB55DD287CD4D5

FASTA45548,878
        10         20         30         40         50         60 
MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIARHILT DVTRVVVDVY GSLSLTGKGH 

        70         80         90        100        110        120 
HTDIAIIMGL AGNLPDTVDI DAIPSFIQDV NTHGRLLLAN GQHEVEFPVD KCMNFHADNL 

       130        140        150        160        170        180 
SLHENGMRIT ALAGDKVLYS QTYYSIGGGF IVDEEHFGLT NSEPVNVPYP YKTAADLQRH 

       190        200        210        220        230        240 
CQETGLSLSG LMMQNELALH SKEALEQHFA RVWEVMRSGI ERGITTEGVL PGKLRVPRRA 

       250        260        270        280        290        300 
AALRRVLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY 

       310        320        330        340        350        360 
DKFIREVNAN SLARYMLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGG 

       370        380        390        400        410        420 
SPAQVCIAAE IAMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAVNAARMA LRRTSEPRVC 

       430        440        450 
LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVTCD 

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References

[1]"Complete genome of Salmonella dublin strain CT_02021853."
Ravel J., Fricke W.F., White D., McDermott P., Mammel M., Rosovitz M., Leclerc J., Cebula T., Sebastian Y.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001144 Genomic DNA. Translation: ACH75334.1.
RefSeqYP_002216945.1. NC_011205.1.

3D structure databases

ProteinModelPortalB5FTX4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5FTX4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6872443.
GenomeReviewsGene locus SeD_A3294 in contig CP001144_GR.
KEGGsed:SeD_A3294.
PATRIC18494693. VBISalEnt111443_3264.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304565.
OMAENGMRIS.
ProtClustDBCLSK880494.

Family and domain databases

InterProIPR004644. Fe-S_L-Ser_mono.
IPR005130. Ser_deHydtase-like_asu.
IPR005131. Ser_deHydtase_bsu.
[Graphical view]
KOK01752.
PfamPF03313. SDH_alpha. 1 hit.
PF03315. SDH_beta. 1 hit.
[Graphical view]
TIGRFAMsTIGR00720. Sda_mono. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5FTX4_SALDC
AccessionPrimary (citable) accession number: B5FTX4
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)