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B5FNF7

- B5FNF7_SALDC

UniProt

B5FNF7 - B5FNF7_SALDC

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Protein
Submitted name: Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component
Gene
sucA, SeD_A0830
Organism
Salmonella dublin (strain CT_02021853)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciSENT439851:GH2Z-820-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:SeD_A0830Imported
OrganismiSalmonella dublin (strain CT_02021853)Imported
Taxonomic identifieri439851 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000008322: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi439851.SeD_A0830.

Structurei

3D structure databases

ProteinModelPortaliB5FNF7.
SMRiB5FNF7. Positions 84-933.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
OMAiGHQNANL.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

B5FNF7-1 [UniParc]FASTAAdd to Basket

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MQNSALKAWL DSSYLSGSNQ SWIEQLYEDF LTDPDSVDAN WRLTFQQLPG    50
TGVKPDQLHS KTREYFRRQA LAGSRHSSTI SDPDTNVKQV KVLQLINAYR 100
FRGHQHANLD PLGLWKQERV ADLDPSFHDL TEADFQETFN VGSFASGKET 150
MKLGELLDAL KQTYCGPIGA EYMHITSTEE KRWIQQRIES GRAAFSADEK 200
KRFLNELTAA EGLERYLGAK FPGAKRFSLE GGDALIPMLK EMVRHAGNSG 250
TREVVLGMAH RGRLNVLINV LGKKPQDLFD EFAGKHKEHL GTGDVKYHMG 300
FSSDIETEGG LVHLALAFNP SHLEIVSPVV MGSVRARLDR LDEPSSNKVL 350
PITIHGDAAV TGQGVVQETL NMSKARGYEV GGTVRIVINN QVGFTTSNPL 400
DARSTPYCTD IGKMVQAPIF HVNADDPEAV AFVTRLALDF RNTFKRDVFI 450
DLVCYRRHGH NEADEPSATQ PLMYQKIKKH PTPRKIYADK LEADKVATLE 500
DATEMVNLYR DALDAGECVV KEWRPMNMHS FTWSPYLNHE WDEAYPNKVE 550
MKRLQELAKR ISTVPEAIEM QSRVAKIYGD RQAMAAGEKL FDWGGAENLA 600
YATLVDEGIP VRLSGEDSGR GTFFHRHAVI HNQTNGSTYT PLQHIHSGQG 650
QFKVWDSVLS EEAVLAFEYG YATAEPRTLT IWEAQFGDFA NGAQVVIDQF 700
ISSGEQKWGR MCGLVMLLPH GYEGQGPEHS SARLERYLQL CAEQNMQVCV 750
PSTPAQVYHM LRRQALRGMR RPLVVMSPKS LLRHPLAVST LDELANGSFQ 800
PAIGEIDELD PKAVKRVVMC SGKVYYDLLE QRRKNDQKDV AIVRIEQLYP 850
FPHKAVQEAL QPYAHVHDFV WCQEEPLNQG AWYCSQHHFR EVIPFGAALR 900
YAGRPASASP AVGYMSVHQK QQQDLVNDAL NVD 933
Length:933
Mass (Da):104,836
Last modified:October 14, 2008 - v1
Checksum:i0445CE6DE4DBA5F8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001144 Genomic DNA. Translation: ACH77976.1.
RefSeqiYP_002214704.1. NC_011205.1.

Genome annotation databases

EnsemblBacteriaiACH77976; ACH77976; SeD_A0830.
PATRICi18489863. VBISalEnt111443_0889.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001144 Genomic DNA. Translation: ACH77976.1 .
RefSeqi YP_002214704.1. NC_011205.1.

3D structure databases

ProteinModelPortali B5FNF7.
SMRi B5FNF7. Positions 84-933.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 439851.SeD_A0830.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACH77976 ; ACH77976 ; SeD_A0830 .
PATRICi 18489863. VBISalEnt111443_0889.

Phylogenomic databases

eggNOGi COG0567.
HOGENOMi HOG000259588.
OMAi GHQNANL.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci SENT439851:GH2Z-820-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution."
    Fricke W.F., Mammel M.K., McDermott P.F., Tartera C., White D.G., Leclerc J.E., Ravel J., Cebula T.A.
    J. Bacteriol. 193:3556-3568(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CT_02021853Imported.

Entry informationi

Entry nameiB5FNF7_SALDC
AccessioniPrimary (citable) accession number: B5FNF7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: July 9, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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