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B5FFL3 (B5FFL3_VIBFM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VFMJ11_1798 EMBL ACH66186.1
OrganismVibrio fischeri (strain MJ11) [Complete proteome] [HAMAP] EMBL ACH66186.1
Taxonomic identifier388396 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL ACH66186.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5FFL3 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: 75BBAE7D85353DDF

FASTA40445,005
        10         20         30         40         50         60 
MQNIGMSSKL SSVCYDIRGP VLKHAKRMEE EGHKILKLNI GNPAPFGFDA PDEILVDVIK 

        70         80         90        100        110        120 
NLPTSQGYCD SKGIYSARKA VVQHYQRRGL LDLDVEDVYI GNGASELIVM AMQALLNNGD 

       130        140        150        160        170        180 
EMLVPAPDYP LWTAAVSLSG GKPVHYMCDE GADWYPDLDD IKKKITPNTK GIVLINPNNP 

       190        200        210        220        230        240 
TGAVYSRDFL LQVVEIARQN NLIIFADEIY DKVLYDGAVH TTLATLAPDI LTVTFNGLSK 

       250        260        270        280        290        300 
AYRVCGFRGG WMFLNGPKDH AQGYIAGLDM LASMRLCANV PMQHAIQTAL GGYQSINELL 

       310        320        330        340        350        360 
LPGGRLLEQR DKAYDLITQI PGVSCVKPKG AMYLFPKLDP KMYKIKDDQK FVLDFLIKEK 

       370        380        390        400 
VLLVQGTGFN WPTPDHFRIV TLPRVDDLET AIGRLERFLH TYKQ 

« Hide

References

[1]"Complete sequence of Vibrio fischeri strain MJ11."
Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MJ11.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001139 Genomic DNA. Translation: ACH66186.1.
RefSeqYP_002156493.1. NC_011184.1.

3D structure databases

ProteinModelPortalB5FFL3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING388396.VFMJ11_1798.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACH66186; ACH66186; VFMJ11_1798.
GeneID6807687.
KEGGvfm:VFMJ11_1798.
PATRIC20122054. VBIVibFis37164_1718.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0436.
HOGENOMHOG000223042.
KOK14260.
OMAYQARDMR.
OrthoDBEOG6X9MJ6.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5FFL3_VIBFM
AccessionPrimary (citable) accession number: B5FFL3
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)