B5FF88 (B5FF88_VIBFM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Thioredoxin PIRNR PIRNR000077

Gene names

Name:	trxA EMBL ACH64943.1
Ordered Locus Names:	VFMJ11_0055

Organism

Vibrio fischeri (strain MJ11) [Complete proteome] [HAMAP] EMBL ACH64943.1

Taxonomic identifier

388396 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio

Protein attributes

Sequence length	108 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the thioredoxin family. PIRNR PIRNR000077

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell redox homeostasis Inferred from electronic annotation. Source: InterPro glycerol ether metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	electron carrier activity Inferred from electronic annotation. Source: InterPro protein disulfide oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Disulfide bond	33 ↔ 36		Redox-active By similarity PIRSR PIRSR000077-4

Sequences

	Sequence		Length	Mass (Da)
	B5FF88 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: 5E92661C3D181909	FASTA	108	11,564
	10 20 30 40 50 60 MSDKILQLTD GGFEESVINA AGPVLVDFWA EWCGPCKMIA PILDEIADEY EGKLTIGKLN 70 80 90 100 IDQNAGTPPK FGIRGIPTLL LFKDGGVAAT KVGALSKTQL KEFLDANL

References

[1]

"Complete sequence of Vibrio fischeri strain MJ11." Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001139 Genomic DNA. Translation: ACH64943.1.
RefSeq	YP_002154826.1. NC_011184.1.
3D structure databases
ProteinModelPortal	B5FF88.
SMR	B5FF88. Positions 2-108.
ModBase	Search...
Protein-protein interaction databases
STRING	B5FF88.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6807396.
GenomeReviews	Gene locus VFMJ11_0055 in contig CP001139_GR.
KEGG	vfm:VFMJ11_0055.
PATRIC	20118563. VBIVibFis37164_0055.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG493509.
OMA	DEGFEND.
ProtClustDB	CLSK873930.
Family and domain databases
InterPro	IPR005746. Thioredoxin. IPR012336. Thioredoxin-like_fold. IPR017937. Thioredoxin_CS. IPR013766. Thioredoxin_domain. [Graphical view]
Gene3D	G3DSA:3.40.30.10. Thioredoxin_fold. 1 hit.
KO	K03671.
PANTHER	PTHR10438. Trx. 1 hit.
Pfam	PF00085. Thioredoxin. 1 hit. [Graphical view]
PIRSF	PIRSF000077. Thioredoxin. 1 hit.
PRINTS	PR00421. THIOREDOXIN.
SUPFAM	SSF52833. Thiordxn-like_fd. 1 hit.
TIGRFAMs	TIGR01068. Thioredoxin. 1 hit.
PROSITE	PS00194. THIOREDOXIN_1. 1 hit. PS51352. THIOREDOXIN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5FF88_VIBFM

Accession

Primary (citable) accession number: B5FF88

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)