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B5FE48

- B5FE48_VIBFM

UniProt

B5FE48 - B5FE48_VIBFM

Protein

Putrescine-binding periplasmic protein

Gene

VFMJ11_1394

Organism
Vibrio fischeri (strain MJ11)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (14 Oct 2008)
      Previous versions | rss
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    Functioni

    Required for the activity of the bacterial periplasmic transport system of putrescine.UniRule annotation

    GO - Molecular functioni

    1. polyamine binding Source: InterPro

    GO - Biological processi

    1. polyamine transport Source: InterPro

    Keywords - Biological processi

    TransportUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putrescine-binding periplasmic proteinUniRule annotation
    Gene namesi
    Ordered Locus Names:VFMJ11_1394Imported
    OrganismiVibrio fischeri (strain MJ11)Imported
    Taxonomic identifieri388396 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000001857: Chromosome I

    Subcellular locationi

    Periplasm UniRule annotation

    GO - Cellular componenti

    1. periplasmic space Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    PeriplasmUniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi388396.VFMJ11_1394.

    Structurei

    3D structure databases

    ProteinModelPortaliB5FE48.
    SMRiB5FE48. Positions 27-343.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the bacterial solute-binding protein PotD/PotF family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0687.
    HOGENOMiHOG000263814.
    KOiK11069.
    OMAiMPDAPIG.
    OrthoDBiEOG66XBH9.

    Family and domain databases

    InterProiIPR001188. Sperm_putr-bd.
    [Graphical view]
    PIRSFiPIRSF019574. Periplasmic_polyamine_BP. 1 hit.
    PRINTSiPR00909. SPERMDNBNDNG.

    Sequencei

    Sequence statusi: Complete.

    B5FE48-1 [UniParc]FASTAAdd to Basket

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    MNKMAAFFTG TACALALTMN VANAKENDEL VFMNWGPYIN SDILEEFTKE    50
    TGIKVIYSTY ESNETLYAKM KAHNKGYDLV VPSTYFVAKM RDEKMLQPID 100
    KSKLSNFTQL DTNYLDKPFD PKNEYSIPHV VAITGLAVNT EMYNPDDFNS 150
    WGDLWNPEFE GQLMLMDDTR EVFHIALRKL GYSGNSTNPK EIDEAYAELQ 200
    KLMPNVLVFN SDNPGAPYMA GEVGLGMLWN GSAAAAQAEG LPIKLIFPKE 250
    GGIGWVDNFA IPSGANNVEA AHKMIDFLLR PEIAARISAD TGYLTAVKAS 300
    NDKFKDVAPL FPSQEDLDRV EWQSAVGDMT VKYEEYFLKL KAGQ 344
    Length:344
    Mass (Da):38,406
    Last modified:October 14, 2008 - v1
    Checksum:i6EFD8992FDA5B48A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001139 Genomic DNA. Translation: ACH66432.1.
    RefSeqiYP_002156113.1. NC_011184.1.

    Genome annotation databases

    EnsemblBacteriaiACH66432; ACH66432; VFMJ11_1394.
    GeneIDi6807781.
    KEGGivfm:VFMJ11_1394.
    PATRICi20121250. VBIVibFis37164_1340.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001139 Genomic DNA. Translation: ACH66432.1 .
    RefSeqi YP_002156113.1. NC_011184.1.

    3D structure databases

    ProteinModelPortali B5FE48.
    SMRi B5FE48. Positions 27-343.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 388396.VFMJ11_1394.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACH66432 ; ACH66432 ; VFMJ11_1394 .
    GeneIDi 6807781.
    KEGGi vfm:VFMJ11_1394.
    PATRICi 20121250. VBIVibFis37164_1340.

    Phylogenomic databases

    eggNOGi COG0687.
    HOGENOMi HOG000263814.
    KOi K11069.
    OMAi MPDAPIG.
    OrthoDBi EOG66XBH9.

    Family and domain databases

    InterProi IPR001188. Sperm_putr-bd.
    [Graphical view ]
    PIRSFi PIRSF019574. Periplasmic_polyamine_BP. 1 hit.
    PRINTSi PR00909. SPERMDNBNDNG.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Vibrio fischeri strain MJ11."
      Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
      Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MJ11Imported.

    Entry informationi

    Entry nameiB5FE48_VIBFM
    AccessioniPrimary (citable) accession number: B5FE48
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 14, 2008
    Last sequence update: October 14, 2008
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3