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B5FE48

- B5FE48_VIBFM

UniProt

B5FE48 - B5FE48_VIBFM

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Protein

Putrescine-binding periplasmic protein

Gene

VFMJ11_1394

Organism
Vibrio fischeri (strain MJ11)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Required for the activity of the bacterial periplasmic transport system of putrescine.UniRule annotation

GO - Molecular functioni

  1. polyamine binding Source: InterPro

GO - Biological processi

  1. polyamine transport Source: InterPro
Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Putrescine-binding periplasmic proteinUniRule annotation
Gene namesi
Ordered Locus Names:VFMJ11_1394Imported
OrganismiVibrio fischeri (strain MJ11)Imported
Taxonomic identifieri388396 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000001857: Chromosome I

Subcellular locationi

Periplasm UniRule annotation

GO - Cellular componenti

  1. periplasmic space Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

PeriplasmUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi388396.VFMJ11_1394.

Structurei

3D structure databases

ProteinModelPortaliB5FE48.
SMRiB5FE48. Positions 27-343.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial solute-binding protein PotD/PotF family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0687.
HOGENOMiHOG000263814.
KOiK11069.
OMAiMPDAPIG.
OrthoDBiEOG66XBH9.

Family and domain databases

InterProiIPR001188. Sperm_putr-bd.
[Graphical view]
PIRSFiPIRSF019574. Periplasmic_polyamine_BP. 1 hit.
PRINTSiPR00909. SPERMDNBNDNG.

Sequencei

Sequence statusi: Complete.

B5FE48-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNKMAAFFTG TACALALTMN VANAKENDEL VFMNWGPYIN SDILEEFTKE
60 70 80 90 100
TGIKVIYSTY ESNETLYAKM KAHNKGYDLV VPSTYFVAKM RDEKMLQPID
110 120 130 140 150
KSKLSNFTQL DTNYLDKPFD PKNEYSIPHV VAITGLAVNT EMYNPDDFNS
160 170 180 190 200
WGDLWNPEFE GQLMLMDDTR EVFHIALRKL GYSGNSTNPK EIDEAYAELQ
210 220 230 240 250
KLMPNVLVFN SDNPGAPYMA GEVGLGMLWN GSAAAAQAEG LPIKLIFPKE
260 270 280 290 300
GGIGWVDNFA IPSGANNVEA AHKMIDFLLR PEIAARISAD TGYLTAVKAS
310 320 330 340
NDKFKDVAPL FPSQEDLDRV EWQSAVGDMT VKYEEYFLKL KAGQ
Length:344
Mass (Da):38,406
Last modified:October 14, 2008 - v1
Checksum:i6EFD8992FDA5B48A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001139 Genomic DNA. Translation: ACH66432.1.
RefSeqiYP_002156113.1. NC_011184.1.

Genome annotation databases

EnsemblBacteriaiACH66432; ACH66432; VFMJ11_1394.
GeneIDi6807781.
KEGGivfm:VFMJ11_1394.
PATRICi20121250. VBIVibFis37164_1340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001139 Genomic DNA. Translation: ACH66432.1 .
RefSeqi YP_002156113.1. NC_011184.1.

3D structure databases

ProteinModelPortali B5FE48.
SMRi B5FE48. Positions 27-343.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 388396.VFMJ11_1394.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACH66432 ; ACH66432 ; VFMJ11_1394 .
GeneIDi 6807781.
KEGGi vfm:VFMJ11_1394.
PATRICi 20121250. VBIVibFis37164_1340.

Phylogenomic databases

eggNOGi COG0687.
HOGENOMi HOG000263814.
KOi K11069.
OMAi MPDAPIG.
OrthoDBi EOG66XBH9.

Family and domain databases

InterProi IPR001188. Sperm_putr-bd.
[Graphical view ]
PIRSFi PIRSF019574. Periplasmic_polyamine_BP. 1 hit.
PRINTSi PR00909. SPERMDNBNDNG.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Vibrio fischeri strain MJ11."
    Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MJ11Imported.

Entry informationi

Entry nameiB5FE48_VIBFM
AccessioniPrimary (citable) accession number: B5FE48
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: October 1, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3