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B5FE31 (B5FE31_VIBFM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.9.3.1 EMBL ACH66632.1
Gene names
Name:ccoN EMBL ACH66632.1
Ordered Locus Names:VFMJ11_1377 EMBL ACH66632.1
OrganismVibrio fischeri (strain MJ11) [Complete proteome] [HAMAP] EMBL ACH66632.1
Taxonomic identifier388396 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length476 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the heme-copper respiratory oxidase family. RuleBase RU000370

Sequences

Sequence LengthMass (Da)Tools
B5FE31 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: 88228D616A583E46

FASTA47653,632
        10         20         30         40         50         60 
MSQVQQHEQN YNYTVVRQFS LVTILWGIVG MGVGVLIAAQ LVWPQLNFDT PWLTYSRLRP 

        70         80         90        100        110        120 
LHTNAVIFAF GTSALFATSY YVVQRTCQTR LFGGPLVAFT FWGWQAIILA AAITLPLGIT 

       130        140        150        160        170        180 
SGKEYAELEW PIDIAITLVW VAYAIVFFGT LFKRKTSHIY VANWFFGAFI LTVAVLHIVN 

       190        200        210        220        230        240 
SLAVPVSLTK SYSMYSGAVD AMVQWWYGHN AVGFLLTAGF LGMMYYFVPK QAERPVYSYR 

       250        260        270        280        290        300 
LSIVHFWALV SLYIWAGPHH LHYTALPDWT QSLGMVMSLV LFAPSWGGMI NGIMTLSGAW 

       310        320        330        340        350        360 
HKLRYDPILR FLIVSLSFYG MSTFEGPMMA IKSVNALSHY TDWTIGHVHS GALGWVAMVS 

       370        380        390        400        410        420 
IGSLYHLIPK LFGQERMYSV SLINVHFWLA TIGTVFYIVA MWISGVMQGL MWRAVNADGT 

       430        440        450        460        470 
LTYSFVESLE ASYPFYFVRF IGGLIFLSGM FLLAYNTYKT ITAPKNSLKA IQQPAQ 

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References

[1]"Complete sequence of Vibrio fischeri strain MJ11."
Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MJ11.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001139 Genomic DNA. Translation: ACH66632.1.
RefSeqYP_002156096.1. NC_011184.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING388396.VFMJ11_1377.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACH66632; ACH66632; VFMJ11_1377.
GeneID6805555.
KEGGvfm:VFMJ11_1377.
PATRIC20121216. VBIVibFis37164_1323.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3278.
HOGENOMHOG000277908.
KOK00404.
OMAYFSSMWI.
OrthoDBEOG6G7QZX.
ProtClustDBPRK14488.

Family and domain databases

Gene3D1.20.210.10. 1 hit.
InterProIPR000883. Cyt_c_Oxase_su1.
IPR023615. Cyt_c_Oxase_su1_BS.
IPR023616. Cyt_c_Oxase_su1_dom.
IPR004677. Cyt_c_oxidase_cbb3_su1.
[Graphical view]
PANTHERPTHR10422. PTHR10422. 1 hit.
PfamPF00115. COX1. 1 hit.
[Graphical view]
SUPFAMSSF81442. SSF81442. 1 hit.
TIGRFAMsTIGR00780. ccoN. 1 hit.
PROSITEPS50855. COX1. 1 hit.
PS00077. COX1_CUB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5FE31_VIBFM
AccessionPrimary (citable) accession number: B5FE31
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: April 16, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)