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Protein
Submitted name:

Cytochrome c oxidase, Cbb3-type, subunit I

Gene

ccoN

Organism
Vibrio fischeri (strain MJ11)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

Protein has several cofactor binding sites:
  • Cu2+UniRule annotationNote: Binds 1 copper ion per subunit, denoted as copper B.UniRule annotation
  • hemeUniRule annotationNote: Binds 2 heme groups per subunit, denoted as high- and low-spin.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi62Iron (low-spin heme axial ligand); via tele nitrogenUniRule annotation1
Metal bindingi209Copper B; via pros nitrogenUniRule annotation1
Metal bindingi259Copper B; via tele nitrogenUniRule annotation1
Metal bindingi260Copper B; via tele nitrogenUniRule annotation1
Metal bindingi347Iron (high-spin heme axial ligand); via tele nitrogenUniRule annotation1
Metal bindingi349Iron (low-spin heme axial ligand); via tele nitrogenUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
Biological processElectron transport, Respiratory chainUniRule annotation, Transport
LigandHemeUniRule annotation, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome c oxidase, Cbb3-type, subunit IImported (EC:1.9.3.1Imported)
Gene namesi
Name:ccoNImported
Ordered Locus Names:VFMJ11_1377Imported
OrganismiVibrio fischeri (strain MJ11)Imported
Taxonomic identifieri388396 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
Proteomesi
  • UP000001857 Componenti: Chromosome I

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 43HelicalSequence analysisAdd BLAST23
Transmembranei63 – 83HelicalSequence analysisAdd BLAST21
Transmembranei95 – 118HelicalSequence analysisAdd BLAST24
Transmembranei130 – 152HelicalSequence analysisAdd BLAST23
Transmembranei164 – 186HelicalSequence analysisAdd BLAST23
Transmembranei206 – 227HelicalSequence analysisAdd BLAST22
Transmembranei239 – 256HelicalSequence analysisAdd BLAST18
Transmembranei276 – 296HelicalSequence analysisAdd BLAST21
Transmembranei308 – 331HelicalSequence analysisAdd BLAST24
Transmembranei351 – 368HelicalSequence analysisAdd BLAST18
Transmembranei380 – 403HelicalSequence analysisAdd BLAST24
Transmembranei433 – 455HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini19 – 476COX1InterPro annotationAdd BLAST458

Sequence similaritiesi

Belongs to the heme-copper respiratory oxidase family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000277908.
KOiK00404.
OMAiAFFLTTP.
OrthoDBiPOG091H04EF.

Family and domain databases

CDDicd01661. cbb3_Oxidase_I. 1 hit.
Gene3Di1.20.210.10. 1 hit.
InterProiView protein in InterPro
IPR023616. Cyt_c_oxase-like_su1_dom.
IPR000883. Cyt_C_Oxase_1.
IPR023615. Cyt_c_Oxase_su1_BS.
IPR004677. Cyt_c_oxidase_cbb3_su1.
PANTHERiPTHR10422. PTHR10422. 1 hit.
PTHR10422:SF32. PTHR10422:SF32. 1 hit.
PfamiView protein in Pfam
PF00115. COX1. 1 hit.
SUPFAMiSSF81442. SSF81442. 1 hit.
TIGRFAMsiTIGR00780. ccoN. 1 hit.
PROSITEiView protein in PROSITE
PS50855. COX1. 1 hit.
PS00077. COX1_CUB. 1 hit.

Sequencei

Sequence statusi: Complete.

B5FE31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQVQQHEQN YNYTVVRQFS LVTILWGIVG MGVGVLIAAQ LVWPQLNFDT
60 70 80 90 100
PWLTYSRLRP LHTNAVIFAF GTSALFATSY YVVQRTCQTR LFGGPLVAFT
110 120 130 140 150
FWGWQAIILA AAITLPLGIT SGKEYAELEW PIDIAITLVW VAYAIVFFGT
160 170 180 190 200
LFKRKTSHIY VANWFFGAFI LTVAVLHIVN SLAVPVSLTK SYSMYSGAVD
210 220 230 240 250
AMVQWWYGHN AVGFLLTAGF LGMMYYFVPK QAERPVYSYR LSIVHFWALV
260 270 280 290 300
SLYIWAGPHH LHYTALPDWT QSLGMVMSLV LFAPSWGGMI NGIMTLSGAW
310 320 330 340 350
HKLRYDPILR FLIVSLSFYG MSTFEGPMMA IKSVNALSHY TDWTIGHVHS
360 370 380 390 400
GALGWVAMVS IGSLYHLIPK LFGQERMYSV SLINVHFWLA TIGTVFYIVA
410 420 430 440 450
MWISGVMQGL MWRAVNADGT LTYSFVESLE ASYPFYFVRF IGGLIFLSGM
460 470
FLLAYNTYKT ITAPKNSLKA IQQPAQ
Length:476
Mass (Da):53,632
Last modified:October 14, 2008 - v1
Checksum:i88228D616A583E46
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001139 Genomic DNA. Translation: ACH66632.1.
RefSeqiWP_012533873.1. NC_011184.1.

Genome annotation databases

EnsemblBacteriaiACH66632; ACH66632; VFMJ11_1377.
KEGGivfm:VFMJ11_1377.

Similar proteinsi

Entry informationi

Entry nameiB5FE31_VIBFM
AccessioniPrimary (citable) accession number: B5FE31
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: August 30, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported