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B5FCJ1

- B5FCJ1_VIBFM

UniProt

B5FCJ1 - B5FCJ1_VIBFM

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Protein
Submitted name:

Glutamate decarboxylase

Gene
VFMJ11_0930
Organism
Vibrio fischeri (strain MJ11)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported
Gene namesi
Ordered Locus Names:VFMJ11_0930Imported
OrganismiVibrio fischeri (strain MJ11)Imported
Taxonomic identifieri388396 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000001857: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi388396.VFMJ11_0930.

Structurei

3D structure databases

ProteinModelPortaliB5FCJ1.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiARYFRQP.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

B5FCJ1-1 [UniParc]FASTAAdd to Basket

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MVTDNKTADA SFESLLRIFT VPEAPDSTLG IIEKELSQNL NQFLREHIVA    50
EEKPLTEIEK DFTDSSMPES PTYVSEHTEH LLDTLVSQSV HTSAPSFIGH 100
MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMLHRLIFGQ 150
KDSFYQHWMH SADHSLGAFC SGGTIANITA LWVARNRLLK PEGDFEGIAK 200
QGLFAALTHY KCNGLAIFVS ERGHYSLKKA ADVLGIGQDG VIAVKTDNNN 250
RVCLDDLELK ITQAKAKNIK PLAIVGVAGT TETGSIDPLR ELANVAQREG 300
CHFHVDAAWG GATLMSNTYR HLLDGIDLAD SVTIDAHKQL YVPMGAGMVI 350
FKDPELMSSI QHHAEYILRK GSKDLGRHTL EGSRSGMAML LYSCFNVISR 400
PGYELLINQS IEKAHYFADL IQQQDDFELI TDPELCLLTY RYVPSNVKAA 450
LAIATDEQKL EIYEHLDNLT KYIQKTQRET GKSFVSRTRL TPEAYQHQPT 500
IVFRVVLANP LTTKEILQNV LIEQREIASS SEISLPLLNQ IVDKILH 547
Length:547
Mass (Da):61,011
Last modified:October 14, 2008 - v1
Checksum:i69572E3FC7F7F31F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001139 Genomic DNA. Translation: ACH65184.1.
RefSeqiWP_012532876.1. NC_011184.1.
YP_002155654.1. NC_011184.1.

Genome annotation databases

EnsemblBacteriaiACH65184; ACH65184; VFMJ11_0930.
GeneIDi6805979.
KEGGivfm:VFMJ11_0930.
PATRICi20120323. VBIVibFis37164_0882.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001139 Genomic DNA. Translation: ACH65184.1 .
RefSeqi WP_012532876.1. NC_011184.1.
YP_002155654.1. NC_011184.1.

3D structure databases

ProteinModelPortali B5FCJ1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 388396.VFMJ11_0930.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACH65184 ; ACH65184 ; VFMJ11_0930 .
GeneIDi 6805979.
KEGGi vfm:VFMJ11_0930.
PATRICi 20120323. VBIVibFis37164_0882.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi ARYFRQP.
OrthoDBi EOG6MSRZP.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Vibrio fischeri strain MJ11."
    Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MJ11.

Entry informationi

Entry nameiB5FCJ1_VIBFM
AccessioniPrimary (citable) accession number: B5FCJ1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: September 3, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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