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B5FBP8

- CAPP_VIBFM

UniProt

B5FBP8 - CAPP_VIBFM

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Vibrio fischeri (strain MJ11)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (14 Oct 2008)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotation

    Cofactori

    Magnesium.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei138 – 1381UniRule annotation
    Active sitei543 – 5431UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    Lyase

    Keywords - Biological processi

    Carbon dioxide fixation

    Keywords - Ligandi

    Magnesium

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:VFMJ11_2420
    OrganismiVibrio fischeri (strain MJ11)
    Taxonomic identifieri388396 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000001857: Chromosome I

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 876876Phosphoenolpyruvate carboxylasePRO_1000129846Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi388396.VFMJ11_2420.

    Structurei

    3D structure databases

    ProteinModelPortaliB5FBP8.
    SMRiB5FBP8. Positions 4-876.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2352.
    HOGENOMiHOG000238648.
    KOiK01595.
    OMAiELSTISC.
    OrthoDBiEOG6TJ7T8.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B5FBP8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNEKYAALKS NVSMLGHLLG NTIRDAHGEE LLAKVETIRK LSKTARAGSD    50
    EDRNALIEEI KSLPDDQLTP VARAFSQFLN LTNMAEQYHT ISRHCEAHVC 100
    EPDAISTLFS KLSQSNVSKL DTAQAVRELN IELVLTAHPT EIARRTMINK 150
    LVKINECLSK LELGDISFSE RDKTERRLEQ LIAQAWHSDV IRQERPTPLD 200
    EAKWGFAVVE NSLWQGIPEF LREFDQRLEG HLGEGLPIDA RPVHMSSWMG 250
    GDRDGNPFVT HKITREVMLL SRWKAADLYL KDINELISEL SMVKCTDEVR 300
    ELAGDQHEPY RAILKQLRTL LGDTLESLDA QMKGELVPNK AILTDADQLW 350
    NPLYACYQSL HACGMGIIAD GSLLDTLRRV KAFGAHLVRL DIRQESTRHS 400
    DVLSELTRYL GIGDYDQWSE QDKISFLVNE LSSKRPLLPR KWEPSPEVQE 450
    VIDTCRVVAE QSKEALGSYV ISMARTASDV LAVHLLLQEA GCPFRMDVCP 500
    LFETLDDLNR SKEVMEQLFS IDWYRGFIQN HQMVMIGYSD SAKDAGVMSA 550
    GWAQYSAMEA LVEVCEKESI ELTLFHGRGG TIGRGGAPAH AALLSQPPKS 600
    LKGGLRVTEQ GEMIRFKLGL PEVAVNSFNL YASAILEANL LPPPEPKQEW 650
    RDLMEVLSEV SCEAYRNVVR GEKDFVPYFR AATPELELGK LPLGSRPAKR 700
    NPNGGVESLR AIPWIFSWSQ NRLVLPAWLG AGEAIQYSID KGHQELLEEM 750
    CREWPFFSTR LGMLEMVYTK CNPQMSEYYD QRLTDKSLWP LGERLRNQLQ 800
    TDIKAVLNVE NNDHLMERDP WGSESIRLRN IYVDPLNMLQ AELLFRTRQQ 850
    EETSPELEEA LMVTIAGIAA GMRNTG 876
    Length:876
    Mass (Da):99,011
    Last modified:October 14, 2008 - v1
    Checksum:iE7C7671A941C8AC1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001139 Genomic DNA. Translation: ACH67224.1.
    RefSeqiYP_002157103.1. NC_011184.1.

    Genome annotation databases

    EnsemblBacteriaiACH67224; ACH67224; VFMJ11_2420.
    GeneIDi6806079.
    KEGGivfm:VFMJ11_2420.
    PATRICi20123314. VBIVibFis37164_2332.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001139 Genomic DNA. Translation: ACH67224.1 .
    RefSeqi YP_002157103.1. NC_011184.1.

    3D structure databases

    ProteinModelPortali B5FBP8.
    SMRi B5FBP8. Positions 4-876.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 388396.VFMJ11_2420.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACH67224 ; ACH67224 ; VFMJ11_2420 .
    GeneIDi 6806079.
    KEGGi vfm:VFMJ11_2420.
    PATRICi 20123314. VBIVibFis37164_2332.

    Phylogenomic databases

    eggNOGi COG2352.
    HOGENOMi HOG000238648.
    KOi K01595.
    OMAi ELSTISC.
    OrthoDBi EOG6TJ7T8.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Vibrio fischeri strain MJ11."
      Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
      Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MJ11.

    Entry informationi

    Entry nameiCAPP_VIBFM
    AccessioniPrimary (citable) accession number: B5FBP8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: October 14, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3