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Protein

Co-chaperone protein HscB homolog

Gene

hscB

Organism
Vibrio fischeri (strain MJ11)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA.UniRule annotation

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Chaperone

Names & Taxonomyi

Protein namesi
Recommended name:
Co-chaperone protein HscB homologUniRule annotation
Gene namesi
Name:hscBUniRule annotation
Ordered Locus Names:VFMJ11_0634
OrganismiVibrio fischeri (strain MJ11)
Taxonomic identifieri388396 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
Proteomesi
  • UP000001857 Componenti: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 171171Co-chaperone protein HscB homologPRO_1000131758Add
BLAST

Interactioni

Subunit structurei

Interacts with HscA and stimulates its ATPase activity.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliB5FAW3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 7473JUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the HscB family.UniRule annotation
Contains 1 J domain.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000262077.
KOiK04082.
OMAiFNPFQIF.
OrthoDBiEOG66F07J.

Family and domain databases

Gene3Di1.10.287.110. 1 hit.
1.20.1280.20. 1 hit.
HAMAPiMF_00682. HscB.
InterProiIPR001623. DnaJ_domain.
IPR004640. HscB.
IPR009073. HscB_oligo_C.
[Graphical view]
PANTHERiPTHR14021. PTHR14021. 1 hit.
PfamiPF07743. HSCB_C. 1 hit.
[Graphical view]
SMARTiSM00271. DnaJ. 1 hit.
[Graphical view]
SUPFAMiSSF46565. SSF46565. 1 hit.
SSF47144. SSF47144. 1 hit.
TIGRFAMsiTIGR00714. hscB. 1 hit.
PROSITEiPS50076. DNAJ_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B5FAW3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNHFELFGLP NQFELDGGLL SLQFRELQKR FHPDNFATSS ERDRLLSIQK
60 70 80 90 100
AAQINDAYQT LKNPVSRAEY ILSEQGHDIR GEQTTMQDPM FLMQQMELRE
110 120 130 140 150
ELESLPSSSD PESALFDFAE NVTAMRKSQL VQLQELLKNE AWIEAAQSVR
160 170
KLKFIEKLNQ EVEQLEEKLL G
Length:171
Mass (Da):19,831
Last modified:October 14, 2008 - v1
Checksum:iD50716DC305A8342
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001139 Genomic DNA. Translation: ACH66665.1.
RefSeqiWP_011261361.1. NC_011184.1.

Genome annotation databases

EnsemblBacteriaiACH66665; ACH66665; VFMJ11_0634.
KEGGivfm:VFMJ11_0634.
PATRICi20119733. VBIVibFis37164_0606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001139 Genomic DNA. Translation: ACH66665.1.
RefSeqiWP_011261361.1. NC_011184.1.

3D structure databases

ProteinModelPortaliB5FAW3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACH66665; ACH66665; VFMJ11_0634.
KEGGivfm:VFMJ11_0634.
PATRICi20119733. VBIVibFis37164_0606.

Phylogenomic databases

HOGENOMiHOG000262077.
KOiK04082.
OMAiFNPFQIF.
OrthoDBiEOG66F07J.

Family and domain databases

Gene3Di1.10.287.110. 1 hit.
1.20.1280.20. 1 hit.
HAMAPiMF_00682. HscB.
InterProiIPR001623. DnaJ_domain.
IPR004640. HscB.
IPR009073. HscB_oligo_C.
[Graphical view]
PANTHERiPTHR14021. PTHR14021. 1 hit.
PfamiPF07743. HSCB_C. 1 hit.
[Graphical view]
SMARTiSM00271. DnaJ. 1 hit.
[Graphical view]
SUPFAMiSSF46565. SSF46565. 1 hit.
SSF47144. SSF47144. 1 hit.
TIGRFAMsiTIGR00714. hscB. 1 hit.
PROSITEiPS50076. DNAJ_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Vibrio fischeri strain MJ11."
    Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MJ11.

Entry informationi

Entry nameiHSCB_VIBFM
AccessioniPrimary (citable) accession number: B5FAW3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: October 14, 2008
Last modified: May 11, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.