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B5F9Y7

- B5F9Y7_VIBFM

UniProt

B5F9Y7 - B5F9Y7_VIBFM

Protein

Malate synthase

Gene

aceB

Organism
Vibrio fischeri (strain MJ11)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (14 Oct 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei168 – 1681Proton acceptorUniRule annotation
    Active sitei449 – 4491Proton donorUniRule annotation

    GO - Molecular functioni

    1. malate synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glyoxylate cycle Source: UniProtKB-UniPathway
    2. tricarboxylic acid cycle Source: UniProtKB-KW

    Keywords - Molecular functioni

    AcyltransferaseImported, Transferase

    Keywords - Biological processi

    Glyoxylate bypassUniRule annotation, Tricarboxylic acid cycleUniRule annotation

    Enzyme and pathway databases

    UniPathwayiUPA00703; UER00720.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Malate synthaseUniRule annotation (EC:2.3.3.9UniRule annotation)
    Gene namesi
    Name:aceBImported
    Ordered Locus Names:VFMJ11_2107Imported
    OrganismiVibrio fischeri (strain MJ11)Imported
    Taxonomic identifieri388396 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000001857: Chromosome I

    Interactioni

    Protein-protein interaction databases

    STRINGi388396.VFMJ11_2107.

    Structurei

    3D structure databases

    ProteinModelPortaliB5F9Y7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the malate synthase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2225.
    HOGENOMiHOG000238464.
    KOiK01638.
    OMAiSIWQWIR.
    OrthoDBiEOG69WFFX.

    Family and domain databases

    InterProiIPR011076. Malate_synth-like.
    IPR006252. Malate_synthA.
    IPR001465. Malate_synthase.
    IPR019830. Malate_synthase_CS.
    [Graphical view]
    PfamiPF01274. Malate_synthase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001363. Malate_synth. 1 hit.
    SUPFAMiSSF51645. SSF51645. 1 hit.
    TIGRFAMsiTIGR01344. malate_syn_A. 1 hit.
    PROSITEiPS00510. MALATE_SYNTHASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B5F9Y7-1 [UniParc]FASTAAdd to Basket

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    MTDTMTIKEQ QITITKPHLP QVEEVLTAGA VRFLTHVVEK FAHRVPELLE    50
    TRQLRQKKID AGQLPNFLSE TRSIRESEWS IQGIPTDLQD RRVEITGPTD 100
    RKMVINALNA NVKVFMADFE DSLSPSWEAV LNGQINLRDA MDGTIQYTNP 150
    QTQKVYQLKQ DPAVLICRVR GLHLPEKHVL FNGVAIPGAL FDFALYFYHN 200
    YQTSLKKGSG PYFYLPKLQA YQEAAWWSDV FSFAEREFGL KQGTIKATVL 250
    IETLPAVFEM DEILYSLKEH IVGLNCGRWD YIFSYIKTLK NHPDRVLPDR 300
    QVVTMEKPFL NAYSRLLIRT CHRRGAFAMG GMAAFIPSKD PEQNDWVLNK 350
    IQTDKSLEAN NGHDGTWVAH PGLADTARAE FDSVLGERMN QLDITRDTDA 400
    PITAEELLAP CEGERTEEGM RHNIRVAVQY IEAWISGNGC VPIYGLMEDA 450
    ATAEISRTSI WQWIQHGKTL DSGAVVTAEL FRTMLLEEMK VIEKELGTER 500
    FDSGQFTQAA KLMEQLTTSD QLTDFLTLPG YQYL 534
    Length:534
    Mass (Da):60,671
    Last modified:October 14, 2008 - v1
    Checksum:i640C2DB5A9FB5B93
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001139 Genomic DNA. Translation: ACH67187.1.
    RefSeqiYP_002156801.1. NC_011184.1.

    Genome annotation databases

    EnsemblBacteriaiACH67187; ACH67187; VFMJ11_2107.
    GeneIDi6806014.
    KEGGivfm:VFMJ11_2107.
    PATRICi20122678. VBIVibFis37164_2029.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001139 Genomic DNA. Translation: ACH67187.1 .
    RefSeqi YP_002156801.1. NC_011184.1.

    3D structure databases

    ProteinModelPortali B5F9Y7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 388396.VFMJ11_2107.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACH67187 ; ACH67187 ; VFMJ11_2107 .
    GeneIDi 6806014.
    KEGGi vfm:VFMJ11_2107.
    PATRICi 20122678. VBIVibFis37164_2029.

    Phylogenomic databases

    eggNOGi COG2225.
    HOGENOMi HOG000238464.
    KOi K01638.
    OMAi SIWQWIR.
    OrthoDBi EOG69WFFX.

    Enzyme and pathway databases

    UniPathwayi UPA00703 ; UER00720 .

    Family and domain databases

    InterProi IPR011076. Malate_synth-like.
    IPR006252. Malate_synthA.
    IPR001465. Malate_synthase.
    IPR019830. Malate_synthase_CS.
    [Graphical view ]
    Pfami PF01274. Malate_synthase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001363. Malate_synth. 1 hit.
    SUPFAMi SSF51645. SSF51645. 1 hit.
    TIGRFAMsi TIGR01344. malate_syn_A. 1 hit.
    PROSITEi PS00510. MALATE_SYNTHASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Vibrio fischeri strain MJ11."
      Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
      Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MJ11Imported.

    Entry informationi

    Entry nameiB5F9Y7_VIBFM
    AccessioniPrimary (citable) accession number: B5F9Y7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 14, 2008
    Last sequence update: October 14, 2008
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3