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Protein
Submitted name:

Alpha-amylase

Gene

SeAg_B3878

Organism
Salmonella agona (strain SL483)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSENT454166:GHBA-3849-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:SeAg_B3878Imported
OrganismiSalmonella agona (strain SL483)Imported
Taxonomic identifieri454166 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000008819 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi454166.SeAg_B3878.

Structurei

3D structure databases

ProteinModelPortaliB5EX75.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

B5EX75-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLAAFALTL IPGIAIASSW TSPGFPTFST QETGRFTSHA ALTKGTRALT
60 70 80 90 100
LHIDQQCWQP SGAIKLNQML SLKPCEGAPP QWRLFKDGDY TITVDTRSGT
110 120 130 140 150
PTLLLSIKTE PERTAQLAYQ CPVWDGSPLT LDVRQTFPEG TVVRDYYSGQ
160 170 180 190 200
TDTVQNGQIT LQPADSHGLL LLERAETHAS APFNWRNATV YFVLTDRFRN
210 220 230 240 250
GDPTNDHSYG RHKDGMQEIG TFHGGDLRGL TSQLDYLQQL GVNALWISSP
260 270 280 290 300
FEQIHGWVGG GTKGDFPHYA YHGYYTQDWT TLDANMGSEA DLRALVDGAH
310 320 330 340 350
QRGIRILFDV VMNHAGYATL ADMQEYQFGA LYLSGAERQK ILGDRWTNWR
360 370 380 390 400
PAAGQSWHSF NDYINFSDSA AWEKWWGKKW IRTDIGDYDS PGFDDLTLSL
410 420 430 440 450
AFLPDIKTES TTPSGLPVFY ANKSDTKAKF IEGYTPRDYL THWLSQWVHD
460 470 480 490 500
YGIDGFRVDT AKNVELPAWQ QLKTQASAAL HEWKQANPDK ALDNSPFWMT
510 520 530 540 550
GEAWGHGVMK SDYYRYGFDA MINFDYQEQA AKAVDCLAEM GPVWQQMADK
560 570 580 590 600
MQDFNVLSYL SSHDTRLFRE GGDKAAELLL LSPGAVQIFY GDESARPFGP
610 620 630 640 650
TGSDPLQGTR SDMNWQDVSG KSAAAVAHWQ RISQFRARHP AIGAGQQTTL
660 670
TLKHGYGFVR QYGDDTVMVV WAGRR
Length:675
Mass (Da):75,670
Last modified:October 14, 2008 - v1
Checksum:i4DE2C2849403EF1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001138 Genomic DNA. Translation: ACH51104.1.
RefSeqiWP_000761309.1. NC_011149.1.
YP_002148593.1. NC_011149.1.

Genome annotation databases

EnsemblBacteriaiACH51104; ACH51104; SeAg_B3878.
PATRICi18485988. VBISalEnt65316_3769.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001138 Genomic DNA. Translation: ACH51104.1.
RefSeqiWP_000761309.1. NC_011149.1.
YP_002148593.1. NC_011149.1.

3D structure databases

ProteinModelPortaliB5EX75.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi454166.SeAg_B3878.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACH51104; ACH51104; SeAg_B3878.
PATRICi18485988. VBISalEnt65316_3769.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciSENT454166:GHBA-3849-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution."
    Fricke W.F., Mammel M.K., McDermott P.F., Tartera C., White D.G., Leclerc J.E., Ravel J., Cebula T.A.
    J. Bacteriol. 193:3556-3568(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SL483Imported.

Entry informationi

Entry nameiB5EX75_SALA4
AccessioniPrimary (citable) accession number: B5EX75
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 27, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.