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B5EUW2 (GLGA_VIBFM) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:VFMJ11_A0932
OrganismVibrio fischeri (strain MJ11) [Complete proteome] [HAMAP]
Taxonomic identifier388396 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

Protein attributes

Sequence length487 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 487487Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126111

Sites

Binding site201ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B5EUW2 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: 938D16569F0ED9A8

FASTA48754,865
        10         20         30         40         50         60 
MVTKTLSIVF VASEVDGLIK SGGLADVAKA LPKSLKELGH SVQIVMPAYK TIAGRDDAEI 

        70         80         90        100        110        120 
ILTTQLEHWP HTAYQVRSLS IDGISVFAIE SGDYFERAEM YAENNQAYAD NGERFAFFSA 

       130        140        150        160        170        180 
ATLDLLPKLL NKKPDIIHVN DWHTGLIPYL LKKRYAENEF YHQTRSVLSI HNAVFKGIFH 

       190        200        210        220        230        240 
YDEIACLSEF KSHFVPEASI SHTHVSMLKA GVQCADKINA VSPNYAKELL TELGSHGMAS 

       250        260        270        280        290        300 
DFQDRESDLI GILNGCDYSE WNPEKDSYIP KQFKVNRISM VRGKKACKAA LQQEVSLPQK 

       310        320        330        340        350        360 
DVAMYGMVCR LTNQKGIQYL LPILEQFLKN DLQLVIVGTG DPVLAARLTE IAQEHSDKFA 

       370        380        390        400        410        420 
FIEAYDNKLA HWVEAGSDFF IMPSEFEPCG LNQIYSMAYG TLPIVREVGG LKDSVNNYDD 

       430        440        450        460        470        480 
DIENATGFSF KNPEPMELLL VLMRSLLLYS QNLNEVKRVQ LHAMKQDFCW NKAALKYIEM 


YRTTINS 

« Hide

References

[1]"Complete sequence of Vibrio fischeri strain MJ11."
Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MJ11.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001133 Genomic DNA. Translation: ACH64090.1.
RefSeqYP_002158480.1. NC_011186.1.

3D structure databases

ProteinModelPortalB5EUW2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING388396.VFMJ11_A0932.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACH64090; ACH64090; VFMJ11_A0932.
GeneID6808044.
KEGGvfm:VFMJ11_A0932.
PATRIC20126090. VBIVibFis37164_3668.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAICVISRI.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_VIBFM
AccessionPrimary (citable) accession number: B5EUW2
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: October 14, 2008
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways