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Protein

Glycogen synthase

Gene

glgA

Organism
Vibrio fischeri (strain MJ11)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei20 – 201ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:VFMJ11_A0932
OrganismiVibrio fischeri (strain MJ11)
Taxonomic identifieri388396 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
ProteomesiUP000001857: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 487487Glycogen synthasePRO_1000126111Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi388396.VFMJ11_A0932.

Structurei

3D structure databases

ProteinModelPortaliB5EUW2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B5EUW2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVTKTLSIVF VASEVDGLIK SGGLADVAKA LPKSLKELGH SVQIVMPAYK
60 70 80 90 100
TIAGRDDAEI ILTTQLEHWP HTAYQVRSLS IDGISVFAIE SGDYFERAEM
110 120 130 140 150
YAENNQAYAD NGERFAFFSA ATLDLLPKLL NKKPDIIHVN DWHTGLIPYL
160 170 180 190 200
LKKRYAENEF YHQTRSVLSI HNAVFKGIFH YDEIACLSEF KSHFVPEASI
210 220 230 240 250
SHTHVSMLKA GVQCADKINA VSPNYAKELL TELGSHGMAS DFQDRESDLI
260 270 280 290 300
GILNGCDYSE WNPEKDSYIP KQFKVNRISM VRGKKACKAA LQQEVSLPQK
310 320 330 340 350
DVAMYGMVCR LTNQKGIQYL LPILEQFLKN DLQLVIVGTG DPVLAARLTE
360 370 380 390 400
IAQEHSDKFA FIEAYDNKLA HWVEAGSDFF IMPSEFEPCG LNQIYSMAYG
410 420 430 440 450
TLPIVREVGG LKDSVNNYDD DIENATGFSF KNPEPMELLL VLMRSLLLYS
460 470 480
QNLNEVKRVQ LHAMKQDFCW NKAALKYIEM YRTTINS
Length:487
Mass (Da):54,865
Last modified:October 14, 2008 - v1
Checksum:i938D16569F0ED9A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001133 Genomic DNA. Translation: ACH64090.1.
RefSeqiYP_002158480.1. NC_011186.1.

Genome annotation databases

EnsemblBacteriaiACH64090; ACH64090; VFMJ11_A0932.
GeneIDi6808044.
KEGGivfm:VFMJ11_A0932.
PATRICi20126090. VBIVibFis37164_3668.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001133 Genomic DNA. Translation: ACH64090.1.
RefSeqiYP_002158480.1. NC_011186.1.

3D structure databases

ProteinModelPortaliB5EUW2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi388396.VFMJ11_A0932.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACH64090; ACH64090; VFMJ11_A0932.
GeneIDi6808044.
KEGGivfm:VFMJ11_A0932.
PATRICi20126090. VBIVibFis37164_3668.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Vibrio fischeri strain MJ11."
    Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MJ11.

Entry informationi

Entry nameiGLGA_VIBFM
AccessioniPrimary (citable) accession number: B5EUW2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: October 14, 2008
Last modified: February 4, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.