B5EUG8 (B5EUG8_VIBFM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Aminomethyltransferase RuleBase RU003981
EC=2.1.2.10 RuleBase RU003981

Gene names

Name:	gcvT EMBL ACH63580.1
Ordered Locus Names:	VFMJ11_A0787

Organism

Vibrio fischeri (strain MJ11) [Complete proteome] [HAMAP]

Taxonomic identifier

388396 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Aliivibrio

Protein attributes

Sequence length	372 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The glycine cleavage system catalyzes the degradation of glycine By similarity. RuleBase RU003981
Catalytic activity	[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. SAAS SAAS006223 RuleBase RU003981
Subunit structure	The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. RuleBase RU003981
Sequence similarities	Belongs to the GcvT family. RuleBase RU003980

Ontologies

Keywords
Molecular function	Aminotransferase SAAS SAAS006223 RuleBase RU003981 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycine catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminomethyltransferase activity Inferred from electronic annotation. Source: EC transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5EUG8 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: C3525AEB02C0D8C6	FASTA	372	40,416
	10 20 30 40 50 60 MSDQLYKTAL YDIHVAAGAK MVPFAGYEMP VQYPLGVKKE HLHTRNAAGL FDVSHMGQLR 70 80 90 100 110 120 LKGQNAAAAL EALVPVDIID LPSQKQRYAF FTNDDGGIMD DLMVANFGDH LFVVVNAACK 130 140 150 160 170 180 EQDIAHLAAN LPADVEIEVI EDRSLLALQG PQAADVLSRL QSSVANMLFM DTAVVEINGI 190 200 210 220 230 240 ECYVSRSGYT GEDGYEISVP NDKVAELAET LTSFEEVEWI GLGARDSLRL ECGLCLYGHD 250 260 270 280 290 300 LDTTTTPVEA SLLWAISKNR RADGERAAGF PGADVILKQI ETKDVNRKRV GLVGQTKAPV 310 320 330 340 350 360 REGCKLYDAN DNEIGIVTSG TAGPTAGKPV SMAYVRTDLA SLGTEVFADV RGKKLPMTVE 370 KMPFVPQRYY RG

References

[1]

"Complete sequence of Vibrio fischeri strain MJ11." Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001133 Genomic DNA. Translation: ACH63580.1.
RefSeq	YP_002158336.1. NC_011186.1.
3D structure databases
ProteinModelPortal	B5EUG8.
ModBase	Search...
Protein-protein interaction databases
STRING	B5EUG8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6808831.
GenomeReviews	Gene locus VFMJ11_A0787 in contig CP001133_GR.
KEGG	vfm:VFMJ11_A0787.
PATRIC	20125806. VBIVibFis37164_3527.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG299834.
OMA	MPVQYPL.
ProtClustDB	CLSK910129.
Family and domain databases
InterPro	IPR013977. GCV_T_C. IPR006222. GCV_T_N. IPR006223. GcvT. [Graphical view]
KO	K00605.
PANTHER	PTHR13847:SF5. PTHR13847:SF5. 1 hit.
Pfam	PF01571. GCV_T. 1 hit. PF08669. GCV_T_C. 1 hit. [Graphical view]
PIRSF	PIRSF006487. GcvT. 1 hit.
TIGRFAMs	TIGR00528. GcvT. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5EUG8_VIBFM

Accession

Primary (citable) accession number: B5EUG8

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)