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B5ET22

- GLPB_VIBFM

UniProt

B5ET22 - GLPB_VIBFM

Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene

glpB

Organism
Vibrio fischeri (strain MJ11)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (14 Oct 2008)
      Previous versions | rss
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    Functioni

    Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.UniRule annotation

    Catalytic activityi

    sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

    Cofactori

    FMN.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glycerol catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Ligandi

    Flavoprotein, FMN

    Enzyme and pathway databases

    UniPathwayiUPA00618; UER00673.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation (EC:1.1.5.3UniRule annotation)
    Short name:
    Anaerobic G-3-P dehydrogenase subunit BUniRule annotation
    Short name:
    Anaerobic G3Pdhase BUniRule annotation
    Gene namesi
    Name:glpBUniRule annotation
    Ordered Locus Names:VFMJ11_A0283
    OrganismiVibrio fischeri (strain MJ11)
    Taxonomic identifieri388396 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
    ProteomesiUP000001857: Chromosome II

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 455455Anaerobic glycerol-3-phosphate dehydrogenase subunit BPRO_1000133376Add
    BLAST

    Interactioni

    Subunit structurei

    Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.UniRule annotation

    Protein-protein interaction databases

    STRINGi388396.VFMJ11_A0283.

    Structurei

    3D structure databases

    ProteinModelPortaliB5ET22.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the anaerobic G-3-P dehydrogenase subunit B family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG3075.
    HOGENOMiHOG000278489.
    KOiK00112.
    OMAiFRSVNIS.
    OrthoDBiEOG6K6V62.

    Family and domain databases

    HAMAPiMF_00753. Glycerol3P_GlpB.
    InterProiIPR003953. FAD_bind_dom.
    IPR009158. G3P_DH_GlpB_su.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
    TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B5ET22-1 [UniParc]FASTAAdd to Basket

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    MNFDTIIIGG GMAGLSCALR CLEAGLKTAV IASGQSALHF SSGSIDVLAK    50
    TPSGEPVSNP MTCIDTFAKE YPNHPYATLG KETVERAIDW YRNTLSTIGV 100
    PLTSQNNGLN HYRLTPLGAM KSTWLSQPFV HQFPMDLEKN KTQKMVLITI 150
    DGFRDFQPKL AQDNLKQITQ LSDLEITTAN ISLSAFNDIQ RNHCELRSID 200
    LSRLLSKRAN RQELAYALQQ HAQPGDLVVI PSIFGNGTGL TYLKEIEQLT 250
    KLTLCEVPTM PPSLLGIRLE ESMKHAFIEL GGTMLNGDHV VQGEFSYVDK 300
    SDPEHSHYRL NRIFTKNHGD FPLQAKQFVL ATGSFFSQGL KANVDSMIEP 350
    IFGLDIAQSD KRTDWYSHDF FSTQSHPFLS MGIKTTANFQ AIKSGHVIDN 400
    LYCAGAILSG YNPILEGSGS GVAISSGFHA AESIIEQLQP NDFFQNNNIK 450
    AEVAL 455
    Length:455
    Mass (Da):50,105
    Last modified:October 14, 2008 - v1
    Checksum:iF46D3D5D07298598
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001133 Genomic DNA. Translation: ACH63492.1.
    RefSeqiYP_002157840.1. NC_011186.1.

    Genome annotation databases

    EnsemblBacteriaiACH63492; ACH63492; VFMJ11_A0283.
    GeneIDi6808274.
    KEGGivfm:VFMJ11_A0283.
    PATRICi20124822. VBIVibFis37164_3046.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001133 Genomic DNA. Translation: ACH63492.1 .
    RefSeqi YP_002157840.1. NC_011186.1.

    3D structure databases

    ProteinModelPortali B5ET22.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 388396.VFMJ11_A0283.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACH63492 ; ACH63492 ; VFMJ11_A0283 .
    GeneIDi 6808274.
    KEGGi vfm:VFMJ11_A0283.
    PATRICi 20124822. VBIVibFis37164_3046.

    Phylogenomic databases

    eggNOGi COG3075.
    HOGENOMi HOG000278489.
    KOi K00112.
    OMAi FRSVNIS.
    OrthoDBi EOG6K6V62.

    Enzyme and pathway databases

    UniPathwayi UPA00618 ; UER00673 .

    Family and domain databases

    HAMAPi MF_00753. Glycerol3P_GlpB.
    InterProi IPR003953. FAD_bind_dom.
    IPR009158. G3P_DH_GlpB_su.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
    TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Vibrio fischeri strain MJ11."
      Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.
      Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MJ11.

    Entry informationi

    Entry nameiGLPB_VIBFM
    AccessioniPrimary (citable) accession number: B5ET22
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: October 14, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3