B5ENZ8 (B5ENZ8_ACIF5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Protein FdhD homolog HAMAP-Rule MF_00187

Gene names

Name:	fdhD HAMAP-Rule MF_00187
Ordered Locus Names:	Lferr_0839

Organism

Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum ferrooxidans (ATCC 53993)) [Complete proteome] [HAMAP] EMBL ACH83089.1

Taxonomic identifier

380394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Acidithiobacillales › Acidithiobacillaceae › Acidithiobacillus › Thiobacillus ferrooxidans

Protein attributes

Sequence length	285 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Necessary for formate dehydrogenase activity By similarity. HAMAP-Rule MF_00187 SAAS SAAS003786
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00187 SAAS SAAS003786.
Sequence similarities	Belongs to the FdhD family. HAMAP-Rule MF_00187

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP-Rule MF_00187 SAAS SAAS003786
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell formate dehydrogenase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	formate dehydrogenase (NAD+) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5ENZ8 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: B3F0ECF93378CC19	FASTA	285	30,758
	10 20 30 40 50 60 MRTDAGGNGI VWSPARRMDG AHGSVKCEEA ILEEMAVSLI LNGKPYAVMM ITPDHLEDFF 70 80 90 100 110 120 MGFLYGEGVI RSVADIITWE SVCIPEGSTL YLQVSAEAEA RAARKRRLVI GGSACGLCGT 130 140 150 160 170 180 PNFEHLVPFA PIPIDHDVCA EPALVHDLLH EMRAHQRLNR HTGTAHAAVL AATNGMTLVR 190 200 210 220 230 240 EDIGRHNAVD KTIGAALRQG WPPSGNILLG VSSRLTFEIA LKALSFQVPI VAAISGVSSL 250 260 270 280 AIRIAQTHNL TLVGYARDQR LTIYAHGERF RGNAATIHDL LCENG

References

[1]

"Complete sequence of Acidithiobacillus ferrooxidans ATCC 53993." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Borole A.P. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 53993.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001132 Genomic DNA. Translation: ACH83089.1.
RefSeq	YP_002219296.1. NC_011206.1.
3D structure databases
ProteinModelPortal	B5ENZ8.
ModBase	Search...
Protein-protein interaction databases
STRING	380394.Lferr_0839.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACH83089; ACH83089; Lferr_0839.
GeneID	6876804.
KEGG	afe:Lferr_0839.
PATRIC	20659258. VBIAciFer6930_0841.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1526.
HOGENOM	HOG000079468.
KO	K02379.
OMA	RRFMALK.
ProtClustDB	CLSK2407640.
Enzyme and pathway databases
BioCyc	AFER380394:GHE0-855-MONOMER.
Family and domain databases
HAMAP	MF_00187. FdhD.
InterPro	IPR003786. Formate_DH_FdhD_su. [Graphical view]
Pfam	PF02634. FdhD-NarQ. 1 hit. [Graphical view]
PIRSF	PIRSF015626. FdhD. 1 hit.
TIGRFAMs	TIGR00129. fdhD_narQ. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5ENZ8_ACIF5

Accession

Primary (citable) accession number: B5ENZ8

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)