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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Lferr_1814

Organism
Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum ferrooxidans (ATCC 53993))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciAFER380394:GHE0-1849-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Lferr_1814Imported
OrganismiAcidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum ferrooxidans (ATCC 53993))Imported
Taxonomic identifieri380394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus
ProteomesiUP000001856 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi380394.Lferr_1814.

Structurei

3D structure databases

ProteinModelPortaliB5EKK0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiNQYLHYH.
OrthoDBiEOG66QKT8.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01339. RuBisCO_L_type2.
InterProiIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B5EKK0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDQSNRYADL SLKEEDLISG GKHILVAYKM KPKAGHGYLE AAAHFAAESS
60 70 80 90 100
TGTNVEVSTT DDFTKGVDAL VYHIDEATED MRIAFPLELF DRNVTDGRMM
110 120 130 140 150
IVSFLTLVIG NNQGMGDIEH GQMIDFFMPP RAIQLFDGPA KDISDLWRIL
160 170 180 190 200
GRPIKDGGYI AGTIIKPKLG LRPEPFAAAA YQFWLGGDFI KNDEPQGNQV
210 220 230 240 250
FAPVKKTIPL VYDAMKRAMD ETGEAKLFSM NITADDHYEM CARADFALET
260 270 280 290 300
FGPDADKLAF LVDGFVGGPG MITTARRQYA GQYLHYHRAG HGMITSPSAK
310 320 330 340 350
RGYTAFVLAK MSRLQGASGI HVGTMGYGKM EGGADDRNIA YMIERDSCDG
360 370 380 390 400
PVYHQEWYGM KPTTPIISGG MNALRLPGFF ENLGHGNVIN TAGGGSYGHI
410 420 430 440 450
DSPAAGAVSL RQAYECWKAG ADPIEYAREH KEFARAFESF PGDADKLYPG

WREKLGVHR
Length:459
Mass (Da):50,383
Last modified:October 14, 2008 - v1
Checksum:i07CAEE6453AF3820
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001132 Genomic DNA. Translation: ACH84035.1.
RefSeqiWP_012537012.1. NC_011206.1.
YP_002220242.1. NC_011206.1.

Genome annotation databases

EnsemblBacteriaiACH84035; ACH84035; Lferr_1814.
KEGGiafe:Lferr_1814.
PATRICi20661234. VBIAciFer6930_1813.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001132 Genomic DNA. Translation: ACH84035.1.
RefSeqiWP_012537012.1. NC_011206.1.
YP_002220242.1. NC_011206.1.

3D structure databases

ProteinModelPortaliB5EKK0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi380394.Lferr_1814.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACH84035; ACH84035; Lferr_1814.
KEGGiafe:Lferr_1814.
PATRICi20661234. VBIAciFer6930_1813.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiNQYLHYH.
OrthoDBiEOG66QKT8.

Enzyme and pathway databases

BioCyciAFER380394:GHE0-1849-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01339. RuBisCO_L_type2.
InterProiIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Acidithiobacillus ferrooxidans ATCC 53993."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Borole A.P.
    Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 53993Imported.

Entry informationi

Entry nameiB5EKK0_ACIF5
AccessioniPrimary (citable) accession number: B5EKK0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: April 1, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.