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B5EIC2 (B5EIC2_GEOBB) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
6-phosphofructokinase HAMAP-Rule MF_00339
Short name=Phosphofructokinase HAMAP-Rule MF_00339
EC=2.7.1.11 HAMAP-Rule MF_00339
Alternative name(s):
Phosphohexokinase HAMAP-Rule MF_00339
Gene names
Name:pfk-3 EMBL ACH39824.1
Synonyms:pfkA HAMAP-Rule MF_00339
Ordered Locus Names:Gbem_2820 EMBL ACH39824.1
OrganismGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) [Complete proteome] [HAMAP] EMBL ACH39824.1
Taxonomic identifier404380 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter ›

Protein attributes

Sequence length390 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate. HAMAP-Rule MF_00339

Pathway

Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4. SAAS SAAS012003 HAMAP-Rule MF_00339

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00339.

Sequence similarities

Belongs to the phosphofructokinase family. HAMAP-Rule MF_00339

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding25 – 295ATP By similarity HAMAP-Rule MF_00339
Nucleotide binding189 – 1935ATP By similarity HAMAP-Rule MF_00339
Nucleotide binding206 – 22217ATP By similarity HAMAP-Rule MF_00339

Sites

Active site1621Proton acceptor By similarity HAMAP-Rule MF_00339
Metal binding2201Magnesium; via carbonyl oxygen By similarity HAMAP-Rule MF_00339
Metal binding2221Magnesium By similarity HAMAP-Rule MF_00339
Binding site1971Substrate By similarity HAMAP-Rule MF_00339
Binding site3011Substrate By similarity HAMAP-Rule MF_00339
Binding site3071Substrate By similarity HAMAP-Rule MF_00339
Binding site3101Substrate By similarity HAMAP-Rule MF_00339

Sequences

Sequence LengthMass (Da)Tools
B5EIC2 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: 03C2596C0A648267

FASTA39042,448
        10         20         30         40         50         60 
MGDRQKTVGV LTGGGDVPGL NPALKTLVTR AVENGYRVLG IRRGWGGLLA YNRDDPHSGE 

        70         80         90        100        110        120 
STLMPLDRHS VRTVDRSGGT FLHTSRTNPG KVATADVPEF LRGADFDPLN PGHHDFTQHV 

       130        140        150        160        170        180 
LANLEHLGVD SLIAIGGDDT LSYAERLFRE GVPVVAIPKT MDNDVFGTDY CIGFSTAVTR 

       190        200        210        220        230        240 
SVNFIHNLRT SAGSHERIAV VELFGRNSGE TSLISAYLAG VDRALISEVP FDVERLALLL 

       250        260        270        280        290        300 
QEDKRSNRSN YAMVTVSEGA SMIGGQTVEY GQEDAYGHKK LGGIGVVVSE AVKGLTGSHI 

       310        320        330        340        350        360 
IYQQLSYLMR SGAPDSLDLM VAYNYANMTM DLISEGMSGR MVSLQGGTYR HIPISTIMQG 

       370        380        390 
EKRVDVAELY DLAEYRPKVR HVLGKPMFLY

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References

[1]"Complete sequence of Geobacter bemidjiensis BEM."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Lovley D., Richardson P.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bem / ATCC BAA-1014 / DSM 16622.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001124 Genomic DNA. Translation: ACH39824.1.
RefSeqYP_002139620.1. NC_011146.1.

3D structure databases

ProteinModelPortalB5EIC2.
ModBaseSearch...

Protein-protein interaction databases

STRING404380.Gbem_2820.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACH39824; ACH39824; Gbem_2820.
GeneID6782819.
KEGGgbm:Gbem_2820.
PATRIC21989314. VBIGeoBem56306_2771.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0205.
HOGENOMHOG000248869.
KOK00850.
OMAQSDEVNA.
ProtClustDBCLSK903978.

Enzyme and pathway databases

BioCycGBEM404380:GHFR-2875-MONOMER.
UniPathwayUPA00109; UER00182.

Family and domain databases

HAMAPMF_00339. Phosphofructokinase.
InterProIPR012003. ATP_PFK_prok.
IPR022953. Phosphofructokinase.
IPR000023. Phosphofructokinase_dom.
[Graphical view]
PfamPF00365. PFK. 2 hits.
[Graphical view]
PIRSFPIRSF000532. ATP_PFK_prok. 1 hit.
PRINTSPR00476. PHFRCTKINASE.
SUPFAMSSF53784. Ppfruckinase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5EIC2_GEOBB
AccessionPrimary (citable) accession number: B5EIC2
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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