B5EE71 (B5EE71_GEOBB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Superoxide dismutase, iron/manganese-containing EMBL ACH39216.1

Gene names

Name:	sodA EMBL ACH39216.1
Ordered Locus Names:	Gbem_2204 EMBL ACH39216.1

Organism

Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) [Complete proteome] [HAMAP] EMBL ACH39216.1

Taxonomic identifier

404380 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter › Geobacter bemidjiensis

Protein attributes

Sequence length	194 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5EE71 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: EB1F3AA1F678A206	FASTA	194	22,301
	10 20 30 40 50 60 MTAFTAKDYS RLIGMPGFSE TLLNNHFTLY QGYVKNTNTL DDALTELRKS GKGSDPGFAE 70 80 90 100 110 120 LKRRFGWEFN GMRLHEYYFE NLGGNQPINQ DGRLASRIHQ DFGGFDEWVQ DFKSVGAMRG 130 140 150 160 170 180 IGWAIMYQDL SNGRLLNFWI NEHDAGHPAG CTPVLIMDVF EHAFMTDYGL KRADYINAFF 190 QNIDWNSAEQ RLQM

References

[1]

"Complete sequence of Geobacter bemidjiensis BEM." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Lovley D., Richardson P. Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bem / ATCC BAA-1014 / DSM 16622.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001124 Genomic DNA. Translation: ACH39216.1.
RefSeq	YP_002139012.1. NC_011146.1.
3D structure databases
ProteinModelPortal	B5EE71.
ModBase	Search...
Protein-protein interaction databases
STRING	404380.Gbem_2204.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACH39216; ACH39216; Gbem_2204.
GeneID	6782198.
KEGG	gbm:Gbem_2204.
PATRIC	21988084. VBIGeoBem56306_2164.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000013583.
KO	K04564.
OMA	IACGMAS.
ProtClustDB	CLSK924471.
Enzyme and pathway databases
BioCyc	GBEM404380:GHFR-2253-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5EE71_GEOBB

Accession

Primary (citable) accession number: B5EE71

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)