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B5EB78 (B5EB78_GEOBB) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:glpA EMBL ACH40370.1
Ordered Locus Names:Gbem_3375 EMBL ACH40370.1
OrganismGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) [Complete proteome] [HAMAP] EMBL ACH40370.1
Taxonomic identifier404380 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length537 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

FAD By similarity.

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. RuleBase RU003891

Sequences

Sequence LengthMass (Da)Tools
B5EB78 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: D11DCCF9EC6E2740

FASTA53758,460
        10         20         30         40         50         60 
MTDRKERLDR LKSGEIFDLL VVGGGATGCG IALDAASRGL KVALAERRDF AGGTSGRSTK 

        70         80         90        100        110        120 
LLHGGVRYLE AAVLHRDRVQ FNLVRDALHE RGVLLKIAPH LCQRLTLVTP LYRLAQVPYM 

       130        140        150        160        170        180 
WAGLKFYDLL ARGAGLGHSR YLSPSEMLRR FPQIKGKGLK GGVLYYDGQF NDARMNVALA 

       190        200        210        220        230        240 
LTALREGAAL SNYLEVVGLV REKGRVAGAL VRDPLGGASW QIRARCVVNA CGPSADLLRR 

       250        260        270        280        290        300 
MDDPTAAPLL RLSRGSHIVL PGKFAPADTG IMIPKTEDGR VVFILPWQGM CLVGTTEEPA 

       310        320        330        340        350        360 
TAGTTPVADD KDVDYLLRHL RRYFNLTVDE GDIMARWAGL RPLVHDPYTA DTAELARDHV 

       370        380        390        400        410        420 
ISCSPTGLIT IVGGKWTTYR KMALDTVDFA VANMGLAPSG ACRTDRIMLH GGKGFEAQGA 

       430        440        450        460        470        480 
TVLAKRFALP PDVALHLHGS YGTLATDVAQ LCQGELGERL VPPHPYLKGE VLYAVRNEMA 

       490        500        510        520        530 
LSPSDFLERR IPLALLDQRG AQIAAPVVLE MMAQELGWSQ VRVAHERSEL SNLLEQG 

« Hide

References

[1]"Complete sequence of Geobacter bemidjiensis BEM."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Lovley D., Richardson P.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bem / ATCC BAA-1014 / DSM 16622.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001124 Genomic DNA. Translation: ACH40370.1.
RefSeqYP_002140166.1. NC_011146.1.

3D structure databases

ProteinModelPortalB5EB78.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING404380.Gbem_3375.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACH40370; ACH40370; Gbem_3375.
GeneID6780233.
KEGGgbm:Gbem_3375.
PATRIC21990380. VBIGeoBem56306_3298.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0578.
HOGENOMHOG000004813.
KOK00111.
OMASYFLTKS.
OrthoDBEOG651SR7.
ProtClustDBCLSK2803547.

Enzyme and pathway databases

BioCycGBEM404380:GHFR-3434-MONOMER.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
PRINTSPR01001. FADG3PDH.
PROSITEPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5EB78_GEOBB
AccessionPrimary (citable) accession number: B5EB78
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: November 13, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)