B5EA84 (B5EA84_GEOBB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deactylase domain protein EMBL ACH38790.1

Gene names

Ordered Locus Names:

Gbem_1774

Organism

Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) [Complete proteome] [HAMAP]

Taxonomic identifier

404380 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter

Protein attributes

Sequence length	279 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5EA84 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: FAA9C74C5E0B55FB	FASTA	279	31,936
	10 20 30 40 50 60 MLNALTIDVE DYFQVNAFEH YIPRENWDRY PLRVAGNVAR LLDLLDEYQV KATFFVLGWV 70 80 90 100 110 120 AERVPGTVRE IQARGHEVAC HGYGHQLIFR IGPQLFRDDI RRAKAVLEDI TGTAVRGYRA 130 140 150 160 170 180 PTYSITRESL WAFDLLLEEG FSFDSSVFPV YHDTYGIPDA PRFPYLVRRA AGTLQEFPLT 190 200 210 220 230 240 TLPLKLAGKS VQLPIAGGGY LRLLPVALIK WGIDRVNQVE GKPCVLYLHP WEIDPDQPRI 250 260 270 QAGWKSRFRH YNNLAKTEDK LRYLLKGVRY GTMSQALGL

References

[1]

"Complete sequence of Geobacter bemidjiensis BEM." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Lovley D., Richardson P. Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bem / ATCC BAA-1014 / DSM 16622.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001124 Genomic DNA. Translation: ACH38790.1.
RefSeq	YP_002138586.1. NC_011146.1.
3D structure databases
ProteinModelPortal	B5EA84.
ModBase	Search...
Protein-protein interaction databases
STRING	B5EA84.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6781763.
GenomeReviews	Gene locus Gbem_1774 in contig CP001124_GR.
KEGG	gbm:Gbem_1774.
PATRIC	21987268. VBIGeoBem56306_1760.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG612640.
OMA	VEDYFQV.
ProtClustDB	CLSK830199.
Family and domain databases
InterPro	IPR022560. DUF3473. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR014344. PEP-CTERM_polysacc_deacetyl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF11959. DUF3473. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03006. PepC_polyde. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5EA84_GEOBB

Accession

Primary (citable) accession number: B5EA84

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)