Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B5E930 (B5E930_GEOBB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:treS EMBL ACH37167.1
Ordered Locus Names:Gbem_0136 EMBL ACH37167.1
OrganismGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) [Complete proteome] [HAMAP] EMBL ACH37167.1
Taxonomic identifier404380 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length1116 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionKinase EMBL ACH37167.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncation binding

Inferred from electronic annotation. Source: InterPro

kinase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5E930 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: 19E272EB7D14CD6F

FASTA1,116128,157
        10         20         30         40         50         60 
MPQRSDKNPL WFKDAIVYEV HIRSFCDSNG DGIGDFRGLL QKLPYLRDLG ITAIWVLPFY 

        70         80         90        100        110        120 
PSPLKDDGYD IADYRSVHPD YGTLRDFQDF LKGAHALGMR VITELVLNHT SDQHPWFQKS 

       130        140        150        160        170        180 
RTSKPGSPWR DFYVWSDTPD KYLDARIIFK DFEVSNWTRD PVAKSYFWHR FYSHQPDLNY 

       190        200        210        220        230        240 
DNPRVHEAMF RVIDFWLGMG VDGLRLDAVP YLYEREGTNC ENLPETYEFL KKLRAYIDAK 

       250        260        270        280        290        300 
YPDRMLLAEA NQWPEDAASY FGGGAACQMC FHFPLMPRMF MALQMEDSFP IINILQQTPV 

       310        320        330        340        350        360 
IPQQCQWALF LRNHDELTLE MVTDEERDYM YRIYARDPRA RINLGIRRRL APLMGDDRRK 

       370        380        390        400        410        420 
IELMNVLLFC LPGTPIIYYG DEIGMGDNYY LGDRNGVRTP MQWSPDRNAG FSPVNPQKLY 

       430        440        450        460        470        480 
LPAIIDPEYH YEARNVENQA KNPSSLLWWM KRMIDLRKRF KAFGWGSVEF MPIENSKVLA 

       490        500        510        520        530        540 
MVRKYEDQSI VVLINLSRST QFVQVNQPRF AGFYPEEMFS RNRFPVIKDS PYGVILGAYD 

       550        560        570        580        590        600 
YHLLLMKDGS EEVKPREEGV LEEVPVTGSW ENVLRSAGLR QLEQSVLPEY LKRSRWFQGK 

       610        620        630        640        650        660 
SRIMVRFSVM EKVPVPVNSS SVILTLLEVS YSEGAPETYL LPLHFVPMDG GGEGILTETP 

       670        680        690        700        710        720 
AAVVCKLRIG DKVGVLYDGT YNSHFRWSLF EMIWRRKAIR TDGGRLSGRP AGGMGALMEG 

       730        740        750        760        770        780 
KEPPFVSQVG KSEQSNTSML FDKHFFLKLY RRLEEGAHPE VEIGRFLSDR IHFQHVAPLA 

       790        800        810        820        830        840 
GTIEYRRPGL EPVAIGMLQA FVPNQGDAWA FTLGEAGQFI DRVLAHREEA KESGTPAVAQ 

       850        860        870        880        890        900 
PDTAATGFST VLHDLIQGLY PEMVALIGKR TAELHLALSS RSDDPSFAPE PFALLYQRSV 

       910        920        930        940        950        960 
YQSMRSRTRK VFDLLRRNLG RLPQELVPEA EALLGMEPEV QGALQKFTAS KFSAMKTRVH 

       970        980        990       1000       1010       1020 
GDYHLGQLLY TGDDFLIMDF EGEPVKSLGE RRIKQSPLRD VAGMMRSFEY AAHAVLMQRP 

      1030       1040       1050       1060       1070       1080 
QVREEDVAFL LPWIQAWCRY NSALFLASYQ KGVEGCNFMP DHPQDVETML RCFMLDKAIY 

      1090       1100       1110 
ELGYELNNRP HWVSIPLRGI VNLLASEKSG PKLGGQ 

« Hide

References

[1]"Complete sequence of Geobacter bemidjiensis BEM."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Lovley D., Richardson P.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bem / ATCC BAA-1014 / DSM 16622.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001124 Genomic DNA. Translation: ACH37167.1.
RefSeqYP_002136963.1. NC_011146.1.

3D structure databases

ProteinModelPortalB5E930.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING404380.Gbem_0136.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACH37167; ACH37167; Gbem_0136.
GeneID6782958.
KEGGgbm:Gbem_0136.
PATRIC21983929. VBIGeoBem56306_0132.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycGBEM404380:GHFR-137-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5E930_GEOBB
AccessionPrimary (citable) accession number: B5E930
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)