B5E8N1 (B5E8N1_GEOBB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cyclic diguanylate phosphodiesterase EMBL ACH38616.1

Gene names

Ordered Locus Names:

Gbem_1598

Organism

Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) [Complete proteome] [HAMAP]

Taxonomic identifier

404380 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter

Protein attributes

Sequence length	411 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	B5E8N1 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: 1E6436DF21558AB8	FASTA	411	46,122
	10 20 30 40 50 60 MSEEKFFLGR QPILDRTQKI VGFELLFRSA ESLQSANFLD VQVASASVIV GALAEFGIED 70 80 90 100 110 120 VLGRHRGFFN VTREMLMSDA VELLPKDRVV IELLETIVVD RDVVERCRTL KSLGFTLALD 130 140 150 160 170 180 DHVYSADFHE IYEAIDIVKV DVLETPAAAL PEMLERLNPW PFTLLAEKVE TAEQYRFCSQ 190 200 210 220 230 240 LGFHLFQGYY FARPVVLRQN KIDIAKIAML RLMQQVMADT ELEEIEETFK QNPGLTYNLL 250 260 270 280 290 300 RLVNSVAIGL RVRIKTLRHA LMVLGMEQLK RWITLALYAS NDSNGVHSPL LEMAATRGKL 310 320 330 340 350 360 MELLVLALKG RAGRELADQA FMVGILSLID VLFDDSMNEL VGKLNLVENV KSALLSCEGE 370 380 390 400 410 LGGLLLLAQR LEEADFEGVN EQLEESGLDL DQLLSCQLET IAWSDSLSAS L

References

[1]

"Complete sequence of Geobacter bemidjiensis BEM." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Lovley D., Richardson P. Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bem / ATCC BAA-1014 / DSM 16622.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001124 Genomic DNA. Translation: ACH38616.1.
RefSeq	YP_002138412.1. NC_011146.1.
3D structure databases
ProteinModelPortal	B5E8N1.
ModBase	Search...
Protein-protein interaction databases
STRING	B5E8N1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6781586.
GenomeReviews	Gene locus Gbem_1598 in contig CP001124_GR.
KEGG	gbm:Gbem_1598.
PATRIC	21986924. VBIGeoBem56306_1589.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG537479.
OMA	RQPIFNR.
ProtClustDB	CLSK2324801.
Family and domain databases
InterPro	IPR014408. dGMP_Pdiesterase_EAL/HD-GYP. IPR001633. Diguanylate_PEstase_EAL_dom. IPR013976. HDOD. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit. G3DSA:1.10.3150.10. HDOD. 1 hit.
KO	K07181.
Pfam	PF00563. EAL. 1 hit. PF08668. HDOD. 1 hit. [Graphical view]
PIRSF	PIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMART	SM00052. EAL. 1 hit. [Graphical view]
SUPFAM	SSF141868. SSF141868. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5E8N1_GEOBB

Accession

Primary (citable) accession number: B5E8N1

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)