B5E6X4 (B5E6X4_STRP4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Hyaluronate lyase Hyl EMBL ACF54992.1

Gene names

Name:	hyl EMBL ACF54992.1
Ordered Locus Names:	SPG_0285

Organism

Streptococcus pneumoniae serotype 19F (strain G54) [Complete proteome] [HAMAP] EMBL ACF54992.1

Taxonomic identifier

512566 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Streptococcaceae › Streptococcus

Protein attributes

Sequence length	1067 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ACF54992.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro carbon-oxygen lyase activity, acting on polysaccharides Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5E6X4 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: 0AB6ABE6DD536900	FASTA	1,067	120,725
	10 20 30 40 50 60 MQTKTKKLIV SLSSLVLSGF LLNHYMTVGA EETTTNTIQQ SQKEVQYQQR DTKNLVENGD 70 80 90 100 110 120 FGQTEDGSSP WTGSKAQGWS AWVDQKNSSA DASTRVIEAK DGAITISSPE KLRAAVHRMV 130 140 150 160 170 180 PIEAKKKYKL RFKIKTDHKV GIAKVRIIEE SGKDKRLWNS ATTSGTKDWQ TIEADYSPTL 190 200 210 220 230 240 DVDKIKLELF YETGTGTVSF KDIELVEVAD QLSEDSQTDK QLEEKIDLPI GKKHVFSLAD 250 260 270 280 290 300 YTYKVENPDV ASVKNGILEP LKEGTTNVIV SKDGKEVKKI PLKILASVKD AYTARLDDWN 310 320 330 340 350 360 GIIAGNQYYD SKNEQMAKLN QELEGKVADS LSSISSQADR TYLWEKFSNY KMSANLTATY 370 380 390 400 410 420 RKLEEMAKQV TNPSSRYYQD ETVVRTVRDS MEWLHKHVYN SEKSIVGNWW DYEIGTPRAI 430 440 450 460 470 480 NNTLSLMKEY FSDEEIKKYT DVIEKFVPDP EHFRKTTDNP FKALGGNLVD MGRVKVIAGL 490 500 510 520 530 540 LRKDDQEISS TIRSIEQVFK LVDQGEGFYQ DGSYIDHTNV AYTGAYGNVL IDGLSQLLPV 550 560 570 580 590 600 IQKTKSPIDK DKMQTMYHWI DKSFAPLLVN GELMDMSRGR SISRANSEGH VAAVEVLRGI 610 620 630 640 650 660 HRIADMSEGE TKQRLQSLVK TIVQSDSYYD VFKNLKTYKD ISLMQSLLSD AGVASVPRPS 670 680 690 700 710 720 YLSAFNKMDK TAMYNAEKGF GFGLSLFSSR TLNYEHMNKE NKRGWYTSDG MFYLYNGDLS 730 740 750 760 770 780 HYSDGYWPTV NPYKMPGTTE TDAKRADSDT GKVLPSAFVG TSKLDDANVT ATMDFTNWNQ 790 800 810 820 830 840 TLTAHKSWFM LKDKIAFLGS NIQNTSTDTA ATTIDQRKLE SSNPYKVYVN DKEASLTEQE 850 860 870 880 890 900 KDYPETQSVF LESFDSKKNI GYFFFKKSSI SMSKALQKGA WKDINEGQSD KEVENEFLTI 910 920 930 940 950 960 SQAHKQNGDS YGYMLIPNVD RATFNQMIKE LESSLIENSE TLQSVYDAKQ GVWGIVKYDD 970 980 990 1000 1010 1020 SVSTISNQFQ VLKRGVYTIR KEGDEYKIAY YNPETQESAP DQEVFKKLEQ AAQPQVQNSK 1030 1040 1050 1060 EKEKSEEEKN HSDQKNLPQT GEGQSILASL GFLLLGAFYL FRRGKNN

References

[1]

"Annotated draft genomic sequence from a Streptococcus pneumoniae type 19F clinical isolate." Dopazo J., Mendoza A., Herrero J., Caldara F., Humbert Y., Friedli L., Guerrier M., Grand-Schenk E., Gandin C., de Francesco M., Polissi A., Buell G., Feger G., Garcia E., Peitsch M., Garcia-Bustos J.F. Microb. Drug Resist. 7:99-125(2001) [PubMed: 11442348] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: G54 EMBL ACF54992.1.

[2]

"Pneumococcal beta glucoside metabolism investigated by whole genome comparison." Mulas L., Trappetti C., Hakenbeck R., Iannelli F., Pozzi G., Davidsen T.M., Tettelin H., Oggioni M. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: G54 EMBL ACF54992.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001015 Genomic DNA. Translation: ACF54992.1.
RefSeq	YP_002037000.1. NC_011072.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B5E6X4.
Protein family/group databases
CAZy	PL8. Polysaccharide Lyase Family 8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBSTRT00000022620; EBSTRP00000021786; EBSTRG00000022620.
GeneID	6479778.
GenomeReviews	Gene locus SPG_0285 in contig CP001015_GR.
KEGG	spx:SPG_0285.
PATRIC	19686082. VBIStrPne77426_0299.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000027679.
HOGENOM	HBG698564.
OMA	GSYIDHT.
ProtClustDB	CLSK559792.
Family and domain databases
InterPro	IPR008929. Chondroitin_lyas. IPR008979. Galactose-bd-like. IPR011013. Glyco_hydro-type_carb-bd. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR023295. Hyaluronate_lyase_beta_dom. IPR014756. Ig_E-set. IPR019931. LPXTG-motif_cell_wall_anchor. IPR011071. Lyase_8-like_C. IPR012970. Lyase_8_alpha_N. IPR004103. Lyase_8_C. IPR003159. Lyase_8_central_dom. IPR012329. Lyase_8_N. [Graphical view]
Gene3D	G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit. G3DSA:2.60.40.1380. Hyaluronate_lyase_beta_dom. 1 hit. G3DSA:2.60.220.10. Lyase_8_C. 1 hit. G3DSA:1.50.10.100. Lyase_8_N. 1 hit.
KO	K01727.
Pfam	PF02278. Lyase_8. 1 hit. PF02884. Lyase_8_C. 1 hit. PF08124. Lyase_8_N. 1 hit. [Graphical view]
SUPFAM	SSF48230. Chondroitin_lyas. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit. SSF81296. Ig_E-set. 1 hit. SSF49863. Lyase_like_C. 1 hit.
TIGRFAMs	TIGR01167. LPXTG_anchor. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5E6X4_STRP4

Accession

Primary (citable) accession number: B5E6X4

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)