B5E646 (B5E646_STRP4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Peptidoglycan GlcNAc deacetylase (PgdA) EMBL ACF55764.1

Gene names

Name:	pgdA EMBL ACF55764.1
Ordered Locus Names:	SPG_1406

Organism

Streptococcus pneumoniae serotype 19F (strain G54) [Complete proteome] [HAMAP] EMBL ACF55764.1

Taxonomic identifier

512566 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Streptococcaceae › Streptococcus

Protein attributes

Sequence length	445 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5E646 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: A8802CBE8048C697	FASTA	445	50,579
	10 20 30 40 50 60 MALIGILAIS ICLLGGFIAF KIYQQKSFEQ KIESLKKEKD DQLSEGNQKE HFRQGQAEVI 70 80 90 100 110 120 AYYPLQGEKV ISSVRELINQ DVKDKLESKD NLVFYYTEQE ESGLKGVVNR NVTKQIYDLV 130 140 150 160 170 180 AFKIEETEKT SLGKVHLTED GQPFTLDQLF SDASKAKEQL IKELTSFIED KKIEQDQSEQ 190 200 210 220 230 240 IVKNFSDQDL SAWNFDYKDS QIILYPSPVV ENLEEIALPV SAFFDVIQSS YLLEKDAALY 250 260 270 280 290 300 QSYFDKKHQK VVALTFDDGP NPATTPQVLE TLAKYDIKAT FFVLGKNVSG NEDLVKRIKS 310 320 330 340 350 360 EGHVVGNHSW SHPILSQLSL DEAKKQITDT EDVLTKVLGS SSKLMRPPYG AITDDIRNSL 370 380 390 400 410 420 DLSFIMWDVD SLDWKSKNXA SILTXIXHQV ANGSIXLMHD IHSPTVNALP RXIEYLKNQG 430 440 YTFVTIPEML NTRLKAHELY YSRDE

References

[1]

"Annotated draft genomic sequence from a Streptococcus pneumoniae type 19F clinical isolate." Dopazo J., Mendoza A., Herrero J., Caldara F., Humbert Y., Friedli L., Guerrier M., Grand-Schenk E., Gandin C., de Francesco M., Polissi A., Buell G., Feger G., Garcia E., Peitsch M., Garcia-Bustos J.F. Microb. Drug Resist. 7:99-125(2001) [PubMed: 11442348] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: G54 EMBL ACF55764.1.

[2]

"Pneumococcal beta glucoside metabolism investigated by whole genome comparison." Mulas L., Trappetti C., Hakenbeck R., Iannelli F., Pozzi G., Davidsen T.M., Tettelin H., Oggioni M. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: G54 EMBL ACF55764.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001015 Genomic DNA. Translation: ACF55764.1.
RefSeq	YP_002038113.1. NC_011072.1.
3D structure databases
ProteinModelPortal	B5E646.
ModBase	Search...
Protein-protein interaction databases
STRING	B5E646.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBSTRT00000021282; EBSTRP00000020448; EBSTRG00000021282.
GeneID	6479325.
GenomeReviews	Gene locus SPG_1406 in contig CP001015_GR.
KEGG	spx:SPG_1406.
PATRIC	19688437. VBIStrPne77426_1469.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000027091.
HOGENOM	HBG703418.
OMA	LVAFKIE.
ProtClustDB	CLSK884105.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR017219. Peptidoglycan_deacetylase. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
Pfam	PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
PIRSF	PIRSF037479. PG_GlcNAc_deacetylase. 1 hit.
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B5E646_STRP4

Accession

Primary (citable) accession number: B5E646

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)