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Protein
Submitted name:

GA22670

Gene

Dpse\GA22670

Organism
Drosophila pseudoobscura pseudoobscura (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
GA22670Imported
Gene namesi
Name:Dpse\GA22670Imported
ORF Names:Dpse_GA22670Imported, GA22670Imported
OrganismiDrosophila pseudoobscura pseudoobscura (Fruit fly)Imported
Taxonomic identifieri46245 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000001819 Componenti: Partially assembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0244073. Dpse\GA22670.

Interactioni

Protein-protein interaction databases

STRINGi7237.FBpp0272803.

Structurei

3D structure databases

ProteinModelPortaliB5DLB2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiB5DLB2.
KOiK00814.
OMAiCAGVEEY.
OrthoDBiEOG76HQ18.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

B5DLB2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGRAAAALP LRQPYPQQQQ QSKLTPSVVI RRWKSFIHSV QKSTTAASAE
60 70 80 90 100
PAAAAAAAAS MTTTTATSHR SRIQSEAFGG RHSPFDARRS FSTSTKMPAK
110 120 130 140 150
CLQLENINPN FITMEYAVRG PLVIRAGEIE KELEKGAKKP FDQVIRANIG
160 170 180 190 200
DCHAMGQQPV TFLRQLLALT FEPRLLDSPD YPEDVKKRAR AILANCQGHS
210 220 230 240 250
VGSYTDSAGL EVVRRQVVDY IEKRDGGVPS DWQNVYLTGG ASPGIKSILS
260 270 280 290 300
LIHAEVGGKP PGVMVPIPQY PLYSATIAEY GMDKVDYYLE EDSGWSLSRK
310 320 330 340 350
ELQRSFDEAK KTCNPRALVV INPGNPTGQV LTRDNIVEII KFANDNGLIL
360 370 380 390 400
LADEVYQDNV YDKNSKFYSF KKVAYEMGEP YRSQELVSFL STSKGFLGEC
410 420 430 440 450
GIRGGYMEVV NLCPQVKAML TKSITAALCS TTAGQVAVSA LVNPPKPGEP
460 470 480 490 500
SYDLFQKEKN ATLAALKERA ELVHKTLSSF EGYKVNPVQG AMYVFPQIEI
510 520 530 540 550
PPKAVEAAKA KGMAPDVFYA FELLETSGIC IVPGSGFGQK PGTYHFRSTI
560 570
LPQTDKLKLM MEKFRVFHAD FMKKYK
Length:576
Mass (Da):63,396
Last modified:October 14, 2008 - v1
Checksum:i24CF70EB85EBA185
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH379063 Genomic DNA. Translation: EDY72311.1.
RefSeqiXP_002133684.1. XM_002133648.1.

Genome annotation databases

EnsemblMetazoaiFBtr0274365; FBpp0272803; FBgn0244073.
GeneIDi6902153.
KEGGidpo:Dpse_GA22670.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH379063 Genomic DNA. Translation: EDY72311.1.
RefSeqiXP_002133684.1. XM_002133648.1.

3D structure databases

ProteinModelPortaliB5DLB2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7237.FBpp0272803.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0274365; FBpp0272803; FBgn0244073.
GeneIDi6902153.
KEGGidpo:Dpse_GA22670.

Organism-specific databases

FlyBaseiFBgn0244073. Dpse\GA22670.

Phylogenomic databases

InParanoidiB5DLB2.
KOiK00814.
OMAiCAGVEEY.
OrthoDBiEOG76HQ18.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution."
    Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L.
    , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A.
    Genome Res. 15:1-18(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25 / Tucson 14011-0121.94Imported.
  2. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25Imported.

Entry informationi

Entry nameiB5DLB2_DROPS
AccessioniPrimary (citable) accession number: B5DLB2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: January 7, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.