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Protein
Submitted name:

ADP-ribosylation factor 1

Gene

arf1l

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandGTP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ADP-ribosylation factor 1Imported
Submitted name:
ADP-ribosylation factor 1-likeImported
Gene namesi
Name:arf1lImported
Synonyms:ARF1Imported, LOC106589321Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili97 – 117Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the small GTPase superfamily. Arf family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOVERGENiHBG002073.

Family and domain databases

InterProiView protein in InterPro
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR024156. Small_GTPase_ARF.
IPR006689. Small_GTPase_ARF/SAR.
PfamiView protein in Pfam
PF00025. Arf. 1 hit.
PRINTSiPR00328. SAR1GTPBP.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiView protein in PROSITE
PS51417. ARF. 1 hit.

Sequencei

Sequence statusi: Complete.

B5DG68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNMFGSLFK GLFGKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG
60 70 80 90 100
FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRERV
110 120 130 140 150
NEAREELQRM LAEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHALRQ
160 170 180
RSWYIQATCA TSGDGLYEGL DWLSNQLKNQ K
Length:181
Mass (Da):20,591
Last modified:October 14, 2008 - v1
Checksum:iC88039A2F001C809
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT043627 mRNA. Translation: ACH70742.1.
BT045630 mRNA. Translation: ACI33892.1.
RefSeqiNP_001167030.1. NM_001173559.1.
XP_014034603.1. XM_014179128.1.
UniGeneiSsa.5997.

Genome annotation databases

GeneIDi100380274.
106589321.

Similar proteinsi

Entry informationi

Entry nameiB5DG68_SALSA
AccessioniPrimary (citable) accession number: B5DG68
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: December 20, 2017
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported